RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 SEBOXQ9HB31 216 aaPredicted RBP14□□□□□ -0.17
COMMD3-210ENST00000472610 FAM96BQ9Y3D0 163 aa14□□□□□ -0.17
COMMD3-210ENST00000472610 H0YAE9 185 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 MT-ND2P03891 347 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 MELTFP08582 738 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 PEX2P28328 305 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 CEBPDP49716 269 aaPredicted RBP13.99□□□□□ -0.17
COMMD3-210ENST00000472610 RPL31P62899 125 aaKnown RBP13.99□□□□□ -0.17
COMMD3-210ENST00000472610 SMN1Q16637 294 aaKnown RBP13.99□□□□□ -0.17
COMMD3-210ENST00000472610 AWAT1Q58HT5 328 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 TMPRSS11AQ6ZMR5 421 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 SERPINA12Q8IW75 414 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 PDZD9Q8IXQ8 264 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 BATF2Q8N1L9 274 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 OR51A4Q8NGJ6 313 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 OR5D14Q8NGL3 314 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 OR10AC1Q8NH08 325 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 SSMEM1Q8WWF3 244 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 TNFRSF14Q92956 283 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 SLAMF9Q96A28 289 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 OPALINQ96PE5 141 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 HSPE1-MOB4S4R3N1 261 aa13.99□□□□□ -0.17
COMMD3-210ENST00000472610 TRBV2A0A0J9YWF9 115 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 hCG_1809904A0A1W2PP81 198 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 A0A1W2PPE2 198 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 A0A1W2PR64 198 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 A0A1W2PRV1 198 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 K7N7A8 449 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 ALX3O95076 343 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 ZFPL1O95159 310 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 CLIC3O95833 236 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 LIMS3P0CW19 117 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 LIMS4P0CW20 117 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 UBE2E1P51965 193 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 ADARB1P78563 741 aaKnown RBP13.98□□□□□ -0.17
COMMD3-210ENST00000472610 COL10A1Q03692 680 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 MED21Q13503 144 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 CCDC58Q4VC31 144 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 CNIH3Q8TBE1 160 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 EMG1Q92979 244 aaKnown RBP13.98□□□□□ -0.17
COMMD3-210ENST00000472610 ZCCHC4Q9H5U6 513 aa13.98□□□□□ -0.17
COMMD3-210ENST00000472610 A0A0U1RQK1 487 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 E9PI62 339 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 F8VVB4 439 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 F8VWA3 439 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 CASQ2O14958 399 aaPredicted RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 NPFFO15130 113 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 INMTO95050 263 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 CRYBA1P05813 215 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 FBP1P09467 338 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 POU3F4P49335 361 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 ACSM1Q08AH1 577 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 PDZK1IP1Q13113 114 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 OGFRL1Q5TC84 451 aaPredicted RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 TMEM200BQ69YZ2 307 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 RPL22L1Q6P5R6 122 aaKnown RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 LDLRAD3Q86YD5 345 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 FAM58AQ8N1B3 248 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 PARP16Q8N5Y8 322 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 ASCC1Q8N9N2 400 aaKnown RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 OR13C9Q8NGT0 318 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 SNX22Q96L94 193 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 PDCD1LG2Q9BQ51 273 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 DPAGT1Q9H3H5 408 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 DCLRE1BQ9H816 532 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 RHOFQ9HBH0 211 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 C19orf12Q9NSK7 152 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 GLS2Q9UI32 602 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 DIMT1Q9UNQ2 313 aaKnown RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 DHDHQ9UQ10 334 aa13.97□□□□□ -0.17
COMMD3-210ENST00000472610 EXOSC1Q9Y3B2 195 aaKnown RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 SF3B6Q9Y3B4 125 aaKnown RBP13.97□□□□□ -0.17
COMMD3-210ENST00000472610 MYL12AP19105 171 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 ETV1P50549 477 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 RPL15P61313 204 aaKnown RBP13.96□□□□□ -0.17
COMMD3-210ENST00000472610 SPIN3Q5JUX0 258 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 GDPD3Q7L5L3 318 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 SAXO1Q8IYX7 474 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 TSEN15Q8WW01 171 aaKnown RBP13.96□□□□□ -0.17
COMMD3-210ENST00000472610 VCXQ9H320 206 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 HEXA-AS1Q9H8Q6 139 aa13.96□□□□□ -0.17
COMMD3-210ENST00000472610 CHCHD3Q9NX63 227 aaKnown RBP13.96□□□□□ -0.17
COMMD3-210ENST00000472610 POM121CA8CG34 1229 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 SPRY1O43609 319 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-210ENST00000472610 SULT1B1O43704 296 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 ZNF737O75373 536 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 HAND1O96004 215 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 BCL3P20749 454 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 CAPGP40121 348 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 IER3P46695 156 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 NPBWR2P48146 333 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-210ENST00000472610 KLRD1Q13241 179 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 ZNF146Q15072 292 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 C8orf59Q8N0T1 100 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-210ENST00000472610 OR8H2Q8N162 312 aa13.95□□□□□ -0.18
COMMD3-210ENST00000472610 ZSCAN4Q8NAM6 433 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-210ENST00000472610 OR4M1Q8NGD0 313 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms