RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ABCA11PQ4W5N1 156 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 SAMD4BQ5PRF9 694 aaKnown RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 PLCXD3Q63HM9 321 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 ZFAND6Q6FIF0 208 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 CD300LDQ6UXZ3 194 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 CYP2R1Q6VVX0 501 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 TMEM179BQ7Z7N9 219 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 BCAS4Q8TDM0 211 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 CAPSLQ8WWF8 208 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 FOXRED1Q96CU9 486 aaPredicted RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 RCHY1Q96PM5 261 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 PBOV1Q9GZY1 135 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 MTCH1Q9NZJ7 389 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 IL36RNQ9UBH0 155 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 HHLA2Q9UM44 414 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 COPS3Q9UNS2 423 aa7.39□□□□□ -1.23
VCL-204ENST00000472585 LSM4Q9Y4Z0 139 aaKnown RBP7.39□□□□□ -1.23
VCL-204ENST00000472585 TMEM269A0A1B0GVZ9 245 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 J3QT63 122 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 GMNNO75496 209 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 INMTO95050 263 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 NXPH2O95156 264 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 GHRHP01286 108 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 IFNGP01579 166 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 RBP4P02753 201 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 TTRP02766 147 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 RPLP1P05386 114 aaKnown RBP7.38□□□□□ -1.23
VCL-204ENST00000472585 SNRNP70P08621 437 aaKnown RBP7.38□□□□□ -1.23
VCL-204ENST00000472585 THBS3P49746 956 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 OR12D2P58182 307 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 MINOS1Q5TGZ0 78 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 ZNF329Q86UD4 541 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 CPOQ8IVL8 374 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 FAM81AQ8TBF8 368 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 CMTM5Q96DZ9 223 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 AKR1E2Q96JD6 320 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 PRR25Q96S07 402 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 FEVQ99581 238 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 LYSTQ99698 3801 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 TTTY10Q9BZA0 68 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 SLC22A13Q9Y226 551 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 MINOS1-NBL1R4GNA1 71 aa7.38□□□□□ -1.23
VCL-204ENST00000472585 DNAH7Q8WXX0 4024 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ACOD1A6NK06 481 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 PSPNO60542 156 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 AZGP1P25311 298 aaKnown RBP7.37□□□□□ -1.23
VCL-204ENST00000472585 CHATP28329 748 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 PRDX6P30041 224 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 GP2P55259 537 aaKnown RBP7.37□□□□□ -1.23
VCL-204ENST00000472585 EDDM3BP56851 147 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 MS4A2Q01362 244 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 GINS1Q14691 196 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ZNF684Q5T5D7 378 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 TMEM236Q5W0B7 351 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 Q6ZSR3 168 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ASRGL1Q7L266 308 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 KRT77Q7Z794 578 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ZNF573Q86YE8 665 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 PGAM4Q8N0Y7 254 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ZNF676Q8N7Q3 588 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ASCC1Q8N9N2 400 aaKnown RBP7.37□□□□□ -1.23
VCL-204ENST00000472585 OR14K1Q8NGZ2 314 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 NDNFQ8TB73 568 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ZNF714Q96N38 554 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 RBM14Q96PK6 669 aaKnown RBP7.37□□□□□ -1.23
VCL-204ENST00000472585 DUX3Q96PT4 197 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 P2RX4Q99571 388 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 SLC25A33Q9BSK2 321 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 TMEM133Q9H2Q1 129 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 LIN7BQ9HAP6 207 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ARL8BQ9NVJ2 186 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 ENPP5Q9UJA9 477 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 V9GYS6 101 aa7.37□□□□□ -1.23
VCL-204ENST00000472585 FAM172BPA6NC97 362 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 CCDC182A6NF36 153 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 NUDT19A8MXV4 375 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 PRR23D1E9PI22 279 aaPredicted RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 LY6LH3BQJ8 138 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 GSC2O15499 205 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 DHRS3O75911 302 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 IGLV1-47P01700 117 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 MRPL3P09001 348 aaKnown RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 PRR23D2P0DMB1 279 aaPredicted RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 CALCBP10092 127 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 ATP6V1B1P15313 513 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 DUSP1P28562 367 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 RPL23AP62750 156 aaKnown RBP7.36□□□□□ -1.23
VCL-204ENST00000472585 CDK5Q00535 292 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 ROM1Q03395 351 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 IL24Q13007 206 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 UBE2V2Q15819 145 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 CLVS2Q5SYC1 327 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 OR2T5Q6IEZ7 315 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 PLEKHG7Q6ZR37 379 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 EGFL6Q8IUX8 553 aa7.36□□□□□ -1.23
VCL-204ENST00000472585 OR8H2Q8N162 312 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms