RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NDUFB7P17568 137 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 FSTP19883 344 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 AMY2BP19961 511 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 PSMA1P25786 263 aaKnown RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 BDKRB2P30411 391 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 CAPZA1P52907 286 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 MLLT11Q13015 90 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 TRAM1Q15629 374 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 TBCEQ15813 527 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 DGUOKQ16854 277 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 ARMCX4Q5H9R4 360 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 SPIN3Q5JUX0 258 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 C1QL2Q7Z5L3 287 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 SATL1Q86VE3 508 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 SVOPQ8N4V2 548 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 TMEM185AQ8NFB2 350 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 OR5D18Q8NGL1 313 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 OR13C5Q8NGS8 318 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 TBC1D15Q8TC07 691 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 RFT1Q96AA3 541 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 DACT3Q96B18 629 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 OR14A2Q96R54 314 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 S100A13Q99584 98 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 CNTD2Q9H8S5 307 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 SEBOXQ9HB31 216 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 PCDHB16Q9NRJ7 776 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 RPUSD1Q9UJJ7 312 aaKnown RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 FOXJ3Q9UPW0 622 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 ABCA1O95477 2261 aa11.77□□□□□ -0.52
BRCA1-211ENST00000472490 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.52
BRCA1-211ENST00000472490 A0A1W2PPH5 198 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 C22orf46C9J442 243 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 KDM4BO94953 1096 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 INMTO95050 263 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF93P35789 620 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-211ENST00000472490 TGFBR2P37173 567 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 DOC2BQ14184 412 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 DDI2Q5TDH0 399 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF367Q7RTV3 350 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 CDH26Q8IXH8 852 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 FAM58AQ8N1B3 248 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 PXT1Q8NFP0 134 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 OR51A2Q8NGJ7 313 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 DERL3Q96Q80 235 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 MGLLQ99685 303 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 DCTN5Q9BTE1 182 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 TMED9Q9BVK6 235 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 FAM192AQ9GZU8 254 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 OPN4Q9UHM6 478 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 MAB21L2Q9Y586 359 aa11.77□□□□□ -0.53
BRCA1-211ENST00000472490 TRBV5-7A0A0A0MS05 114 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 A0A1B0GW55 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 MEGF11A6BM72 1044 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 AVPP01185 164 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L2P0CJ85 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L3P0CJ86 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L4P0CJ87 422 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L5P0CJ88 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L6P0CJ89 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L7P0CJ90 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 PRKACAP17612 351 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 IGFBP3P17936 291 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-211ENST00000472490 BCL3P20749 454 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 FPR2P25090 351 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 NPBWR2P48146 333 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 MTNR1BP49286 362 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 TPBGQ13641 420 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 ZNF146Q15072 292 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 ACSM3Q53FZ2 586 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 LIPKQ5VXJ0 399 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4L9Q6RFH8 374 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-211ENST00000472490 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-211ENST00000472490 BATF2Q8N1L9 274 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 NKAIN3Q8N8D7 197 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 OR52N4Q8NGI2 321 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 C8orf46Q8TAG6 207 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 TNFAIP8L1Q8WVP5 186 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 PHYHIPQ92561 330 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 HMG20AQ9NP66 347 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 ACOT13Q9NPJ3 140 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 RBFOX1Q9NWB1 397 aaKnown RBP11.76□□□□□ -0.53
BRCA1-211ENST00000472490 DUX4Q9UBX2 424 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 NUP50Q9UKX7 468 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 LRRC42Q9Y546 428 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 KPTNQ9Y664 436 aa11.76□□□□□ -0.53
BRCA1-211ENST00000472490 TEP1Q99973 2627 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms