RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, human

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-215	ENST00000469717	OPN1LW	P04000	364 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	CD55	P08174	381 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	PGA3	P0DJD8	388 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	MYF5	P13349	255 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	SLC37A1	P57057	533 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	FOXL2	P58012	376 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	FXYD4	P59646	89 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	NUTF2	P61970	127 aa	Known RBP	6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	PHLDA2	Q53GA4	152 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	LBH	Q53QV2	105 aa	Predicted RBP	6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	SPSB3	Q6PJ21	355 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	C6orf201	Q7Z4U5	140 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	OR5AS1	Q8N127	324 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	OR10S1	Q8NGN2	331 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	ELSPBP1	Q96BH3	223 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	OR2M4	Q96R27	311 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	GPER1	Q99527	375 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	METTL9	Q9H1A3	318 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	HRASLS2	Q9NWW9	162 aa		6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	MCTS1	Q9ULC4	181 aa	Known RBP	6.98	□□□□□ -1.29
TPM3-215	ENST00000469717	COL6A6	A6NMZ7	2263 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	RBFOX3	A6NFN3	312 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	RPL36A-HNRNPH2	H7BZ11	118 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717		K7N7A8	449 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SCD	O00767	359 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	MSTN	O14793	375 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	HPN	P05981	417 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ZNF823	P16415	610 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	LMO1	P25800	156 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	HSD11B1	P28845	292 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	RAB1A	P62820	205 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	TMEM123	Q8N131	208 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ADAMTS18	Q8TE60	1221 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	DGAT2	Q96PD7	388 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	PBOV1	Q9GZY1	135 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ADAM19	Q9H013	955 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	CBLN4	Q9NTU7	201 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	MEMO1	Q9Y316	297 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SMCO3	A2RU48	225 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	FAM24A	A6NFZ4	105 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	CEACAM18	A8MTB9	384 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	AHSA1	O95433	338 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ONECUT2	O95948	504 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	DBH	P09172	617 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	OR5AC1	P0C628	307 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SEC11B	P0C7V7	166 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	OPRM1	P35372	400 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	P2RY1	P47900	373 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	TMEM196	Q5HYL7	178 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	RABEPK	Q7Z6M1	372 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ZNF248	Q8NDW4	579 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	THRSP	Q92748	146 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	LIN37	Q96GY3	246 aa	Predicted RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SNHG12	Q9BXW3	62 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	OR8D2	Q9GZM6	311 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ELL3	Q9HB65	397 aa	Predicted RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	C1orf123	Q9NWV4	160 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	FAM206A	Q9NX38	181 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	POLE	Q07864	2286 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	MARCH11	A6NNE9	402 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717		C9J4A7	227 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717		E9PLN8	166 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	PTBP3	O95758	552 aa	Known RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	CELA2B	P08218	269 aa	Predicted RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SRP19	P09132	144 aa	Known RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	BLVRB	P30043	206 aa	Predicted RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	CDA	P32320	146 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SULF2	Q8IWU5	870 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	OR51T1	Q8NGJ9	327 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	OR5L1	Q8NGL2	311 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	OR11L1	Q8NGX0	322 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	RSC1A1	Q92681	617 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	FAM210B	Q96KR6	192 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	GINS3	Q9BRX5	216 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	PBDC1	Q9BVG4	233 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	S1PR5	Q9H228	398 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	ARV1	Q9H2C2	271 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	C14orf166	Q9Y224	244 aa	Known RBP	6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	TP53TG5	Q9Y2B4	290 aa		6.97	□□□□□ -1.29
TPM3-215	ENST00000469717	SHISA8	B8ZZ34	492 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	TNF	P01375	233 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	AMBP	P02760	352 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	ISG15	P05161	165 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	OR4A8	P0C604	315 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	TBP	P20226	339 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	EPHA1	P21709	976 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	BLK	P51451	505 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	AFF3	P51826	1226 aa	Known RBP	6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	TNFRSF9	Q07011	255 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	CHRFAM7A	Q494W8	412 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	HIKESHI	Q53FT3	197 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	SGPP2	Q8IWX5	399 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	TMEM217	Q8N7C4	229 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	OR2G3	Q8NGZ4	309 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	CCNL2	Q96S94	520 aa	Predicted RBP	6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	DDA1	Q9BW61	102 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	MAGT1	Q9H0U3	335 aa		6.96	□□□□□ -1.29
TPM3-215	ENST00000469717	PNO1	Q9NRX1	252 aa	Known RBP	6.96	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms