RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 TMPRSS11AQ6ZMR5 421 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 KCTD8Q6ZWB6 473 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 RFPL4BQ6ZWI9 263 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MYPOPQ86VE0 399 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 WDFY1Q8IWB7 410 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF679Q8IYX0 411 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF101Q8IZC7 436 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 C8orf59Q8N0T1 100 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 OR5AS1Q8N127 324 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MUC20Q8N307 709 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF786Q8N393 782 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 SPICQ8N5J4 248 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 BHLHE23Q8NDY6 225 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CCDC54Q8NEL0 328 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 WFDC11Q8NEX6 87 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 OR8G5Q8NG78 346 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 RNF133Q8WVZ7 376 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CPNE2Q96FN4 548 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MED30Q96HR3 178 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 REEP6Q96HR9 211 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF75AQ96N20 296 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 GAL3ST1Q99999 423 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MICU1Q9BPX6 476 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 PAPOLGQ9BWT3 736 aaKnown RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 NMNAT2Q9BZQ4 307 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 COMMD4Q9H0A8 199 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 INPP5EQ9NRR6 644 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MRPL22Q9NWU5 206 aaKnown RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MRPL15Q9P015 296 aaKnown RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 IL19Q9UHD0 177 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 KCNS2Q9ULS6 477 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 STARD10Q9Y365 291 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 SNX5Q9Y5X3 404 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ABCA12Q86UK0 2595 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CRYBG3Q68DQ2 2970 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 LOC100130705A0A1B0GUX0 176 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 IQCF6A8MYZ5 107 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 FAM90A26D6RGX4 464 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 MITFO75030 526 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-208ENST00000469585 CLPTM1O96005 669 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 CYB5AP00167 134 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 WNT5AP41221 380 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 RPS27P42677 84 aaKnown RBP5.23□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF121P58317 390 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-208ENST00000469585 ERVS71-1P61550 626 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 HIST1H3AP68431 136 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 PSG7Q13046 419 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 HIST2H3PS2Q5TEC6 136 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 OR2T2Q6IF00 324 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 FAM166AQ6J272 317 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 FIP1L1Q6UN15 594 aaKnown RBP5.23□□□□□ -1.57
PTCD3-208ENST00000469585 HIST2H3AQ71DI3 136 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 ACBD7Q8N6N7 88 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 C10orf105Q8TEF2 133 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 SLC7A6Q92536 515 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 ADAT1Q9BUB4 502 aaKnown RBP5.23□□□□□ -1.57
PTCD3-208ENST00000469585 RTL8AQ9BWD3 113 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 MARCH7Q9H992 704 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 SCN3BQ9NY72 215 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 HAO2Q9NYQ3 351 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 GNG8Q9UK08 70 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 SLC7A11Q9UPY5 501 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 LRP12Q9Y561 859 aa5.23□□□□□ -1.57
PTCD3-208ENST00000469585 ALPK2Q86TB3 2170 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 CELSR2Q9HCU4 2923 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 SPG11Q96JI7 2443 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 TRIM64A6NGJ6 449 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 TRIM64BA6NI03 449 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 METTL15A6NJ78 407 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 CD300LBA8K4G0 201 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 B4DSR2 109 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 MAGEB3O15480 346 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 GATBO75879 557 aaKnown RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 SULT1C4O75897 302 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 RPP14O95059 124 aaKnown RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 NGFP01138 241 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 IGHV1-46P01743 117 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 CD55P08174 381 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 HTR1AP08908 422 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 SBK2P0C263 348 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 UBCP0CG48 685 aaKnown RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 SLC2A1P11166 492 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 CPT2P23786 658 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 MPV17P39210 176 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 OPRL1P41146 370 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 CRYBB2P43320 205 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 RANBP1P43487 201 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 GBX2P52951 348 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 MFAP4P55083 255 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 SNRPGP62308 76 aaKnown RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 CSNK2BP67870 215 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 SLC34A1Q06495 639 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 LOXL1Q08397 574 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 RIPPLY1Q0D2K3 151 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 RAB40BQ12829 278 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 GK2Q14410 553 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-208ENST00000469585 PCK2Q16822 640 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF684Q5T5D7 378 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 OTPQ5XKR4 325 aa5.22□□□□□ -1.57
PTCD3-208ENST00000469585 LRRN1Q6UXK5 716 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms