RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 MICU1Q9BPX6 476 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 NABP2Q9BQ15 211 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 FAM110AQ9BQ89 295 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 COPS4Q9BT78 406 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 RTL8AQ9BWD3 113 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-209ENST00000469511 ZFP57Q9NU63 452 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 TAS2R1Q9NYW7 299 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 OR14J1Q9UGF5 321 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 BAG5Q9UL15 447 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 LYVE1Q9Y5Y7 322 aa4.1□□□□□ -1.75
PTPN4-209ENST00000469511 A0A087WWL8 130 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 DHRS12A0PJE2 317 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 TMEM120BA0PK00 339 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 UNC119BA6NIH7 251 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 ZNF732B4DXR9 585 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 H3BSH0 61 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 XRCC2O43543 280 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 LY6G6CO95867 125 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 RENP00797 406 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 SPARCP09486 303 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 CLUP10909 449 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 AZGP1P25311 298 aaKnown RBP4.09□□□□□ -1.75
PTPN4-209ENST00000469511 EDDM3BP56851 147 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 SELENOWP63302 87 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 RAB32Q13637 225 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 EIF2B1Q14232 305 aaKnown RBP4.09□□□□□ -1.75
PTPN4-209ENST00000469511 DIAPH2-AS1Q14236 149 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 HNF4GQ14541 408 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 KIR2DS1Q14954 304 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 SLC36A3Q495N2 470 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 MINOS1Q5TGZ0 78 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 HAGHLQ6PII5 290 aaPredicted RBP4.09□□□□□ -1.75
PTPN4-209ENST00000469511 SMARCD3Q6STE5 483 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 DPY19L2P2Q6ZN68 376 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 Q6ZRM9 215 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 ZNF676Q8N7Q3 588 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 RNF152Q8N8N0 203 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 OR5M8Q8NGP6 311 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 OR4Q3Q8NH05 313 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 RASSF5Q8WWW0 418 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 LINC00476Q8WZB0 136 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 RNFT2Q96EX2 444 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 TMEM120AQ9BXJ8 343 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 C1orf21Q9H246 121 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 OR52D1Q9H346 318 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 GNB4Q9HAV0 340 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 ZMAT5Q9UDW3 170 aaKnown RBP4.09□□□□□ -1.75
PTPN4-209ENST00000469511 TAGLN3Q9UI15 199 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 LRP12Q9Y561 859 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 COMMD3-BMI1R4GMX3 469 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 MINOS1-NBL1R4GNA1 71 aa4.09□□□□□ -1.75
PTPN4-209ENST00000469511 HTR3EA5X5Y0 456 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 TMEM210A6NLX4 147 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 ANXA2P2A6NMY6 339 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 SERPINE3A8MV23 424 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 LY6LH3BQJ8 138 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 K7N7A8 449 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 ZNF593O00488 134 aaPredicted RBP4.08□□□□□ -1.76
PTPN4-209ENST00000469511 LDLRAD4O15165 306 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 ZNF737O75373 536 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 DEDDO75618 318 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 INMTO95050 263 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 CST4P01036 141 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 IGHV4-30-4P0DP06 118 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 GP9P14770 177 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 HTR1DP28221 377 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 RPS6KA3P51812 740 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 SLC7A2P52569 658 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 PTTG1IPP53801 180 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.08□□□□□ -1.76
PTPN4-209ENST00000469511 FHL3Q13643 280 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 KIAA0141Q14154 515 aaPredicted RBP4.08□□□□□ -1.76
PTPN4-209ENST00000469511 EDDM3AQ14507 147 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 TAF13Q15543 124 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 SNAPC1Q16533 368 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 HAGHQ16775 308 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 PRAMEF5Q5TYX0 476 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 PLBD1Q6P4A8 553 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 DNM1P34Q6PK57 102 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 C16orf82Q7Z2V1 217 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 PIGWQ7Z7B1 504 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 CPLX4Q7Z7G2 160 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 CALHM1Q8IU99 346 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 TIGD4Q8IY51 512 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 STPG2Q8N412 459 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 ZNF561Q8N587 486 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 C5orf56Q8N8D9 126 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 POC1AQ8NBT0 407 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 OR11H1Q8NG94 326 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 OR52N4Q8NGI2 321 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 OR52J3Q8NH60 311 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 GATAD1Q8WUU5 269 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 CAPSLQ8WWF8 208 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 LZICQ8WZA0 190 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 DDB2Q92466 427 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 DCUN1D4Q92564 292 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 ITFG2Q969R8 447 aa4.08□□□□□ -1.76
PTPN4-209ENST00000469511 C20orf173Q96LM9 149 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms