RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SLC25A43Q8WUT9 341 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SKA2Q8WVK7 121 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM234Q8WY98 164 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TSLPQ969D9 159 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZG16BQ96DA0 208 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TBX15Q96SF7 602 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SLC6A7Q99884 636 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ABHD6Q9BV23 337 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 OR10A5Q9H207 317 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CST9LQ9H4G1 147 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SYNPO2LQ9H987 977 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 PELI2Q9HAT8 420 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZCCHC3Q9NUD5 404 aaKnown RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CLDND1Q9NY35 253 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 C5AR2Q9P296 337 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 IL36AQ9UHA7 158 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 C14orf166Q9Y224 244 aaKnown RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 FUT9Q9Y231 359 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SIGLEC7Q9Y286 467 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 LAMTOR2Q9Y2Q5 125 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 HS3ST3B1Q9Y662 390 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 KIF26AQ9ULI4 1882 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 TRBV9A0A0B4J1U6 114 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 A0A1W2PR48 441 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 MYBPHLA2RUH7 354 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ANKUB1A6NFN9 424 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF860A6NHJ4 632 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR5B21A6NL26 309 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR2AG2A6NM03 316 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 CPSF4LA6NMK7 179 aaKnown RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM250H0YL14 139 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 H7BYZ3 331 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 CORTO00230 105 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SIRPB1O00241 398 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 COCHO43405 550 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 NME2P1O60361 137 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RAMP1O60894 148 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PIAS2O75928 621 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 HRASP01112 189 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PDGFBP01127 241 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 HLA-HP01893 362 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 KLK1P06870 262 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PFN1P07737 140 aaKnown RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RHOCP08134 193 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR4A8P0C604 315 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR4Q2P0C623 313 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PIRTP0C851 137 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 GLI4P10075 376 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ATP1B2P14415 290 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 NPPBP16860 134 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF43P17038 809 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ADRA2CP18825 462 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 CD22P20273 847 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 HOXD9P28356 352 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 CMPK1P30085 196 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ACVRL1P37023 503 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 CDKN2AP42771 156 aaKnown RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SELENOVP59797 346 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 S100A10P60903 97 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RND3P61587 244 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RPL23AP62750 156 aaKnown RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 COL10A1Q03692 680 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RBPJQ06330 500 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 GPR18Q14330 331 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 MPV17LQ2QL34 196 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 LRRC10Q5BKY1 277 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PLAC9Q5JTB6 97 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 C10orf120Q5SQS8 335 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SDHAF4Q5VUM1 108 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 AADACL3Q5VUY0 350 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 FCRL6Q6DN72 434 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 FAM71F2Q6NXP2 309 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 FAM151BQ6UXP7 276 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 COX15Q7KZN9 410 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RNF44Q7L0R7 432 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF627Q7L945 461 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 MRGPRGQ86SM5 289 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 NIT1Q86X76 327 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 LYG1Q8N1E2 194 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 LRTM2Q8N967 370 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR51D1Q8NGF3 324 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR5A2Q8NGI9 324 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR2T10Q8NGZ9 312 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR5K2Q8NHB8 316 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PPTC7Q8NI37 304 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 CMTM2Q8TAZ6 248 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PGAM5Q96HS1 289 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 LMLNQ96KR4 655 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 AMDHD1Q96NU7 426 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 IL17FQ96PD4 163 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SPIN2AQ99865 258 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SPIN2BQ9BPZ2 258 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 PDCD1LG2Q9BQ51 273 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 MACROD1Q9BQ69 325 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SLC46A2Q9BY10 475 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 SPATC1LQ9H0A9 340 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms