RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 IGHV3-72A0A0B4J1Y9 119 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 TMEM150BA6NC51 233 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 NDUFS8O00217 210 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 SERPINB7O75635 380 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 MPZL1O95297 269 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 CSTAP01040 98 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 IGLV3-25P01717 112 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 IVLP07476 585 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 DCNP07585 359 aaKnown RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 THRAP10827 490 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 UBE2E1P51965 193 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 YWHAEP62258 255 aaKnown RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 XIAPP98170 497 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 PPIDQ08752 370 aaKnown RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 PNOCQ13519 176 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 N4BP2L1Q5TBK1 243 aaPredicted RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 OR2T5Q6IEZ7 315 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 BHLHA15Q7RTS1 189 aaPredicted RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 TMEM256Q8N2U0 113 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 ZNF645Q8N7E2 425 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 UBAC2Q8NBM4 344 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 NECAP1Q8NC96 275 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 OR1J4Q8NGS1 313 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 OR2T29Q8NH02 315 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 TCP10LQ8TDR4 215 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 RXFP4Q8TDU9 374 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 BAALCQ8WXS3 180 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 GHSRQ92847 366 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 RCN3Q96D15 328 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 KCNS1Q96KK3 526 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 UBE2E2Q96LR5 201 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 SIKE1Q9BRV8 207 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 TOLLIPQ9H0E2 274 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 C1orf198Q9H425 327 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 ZNF835Q9Y2P0 537 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 CSMD1Q96PZ7 3565 aa2.93□□□□□ -1.94
LSM5-209ENST00000468872 CPSF1Q10570 1443 aaKnown RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 USP42Q9H9J4 1324 aaKnown RBP2.93□□□□□ -1.94
LSM5-209ENST00000468872 BRWD1Q9NSI6 2320 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 PDZD2O15018 2839 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 AKAP13Q12802 2813 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 PKD1L1Q8TDX9 2849 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 IGHV7-4-1A0A0J9YVY3 117 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 A0A1B0GUH1 482 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 OR5H1A6NKK0 313 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 COLCA2A8K830 154 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 HACD1B0YJ81 288 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 TAAR5O14804 337 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 SNAI1O95863 264 aaPredicted RBP2.92□□□□□ -1.94
LSM5-209ENST00000468872 TGM6O95932 706 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 IGHV3-11P01762 117 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 CD9P21926 228 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 CCNG1P51959 295 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 ZNF880Q6PDB4 577 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 ASCL4Q6XD76 172 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 SHISA6Q6ZSJ9 500 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 H1FOOQ8IZA3 346 aaPredicted RBP2.92□□□□□ -1.94
LSM5-209ENST00000468872 ZNF709Q8N972 641 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 TMEM104Q8NE00 496 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 FBXO36Q8NEA4 188 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 TTLQ8NG68 377 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 C17orf50Q8WW18 174 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 OR10C1Q96KK4 312 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 FAM19A4Q96LR4 140 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 C18orf15Q96N68 181 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 TEAD3Q99594 435 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 RHOXF2Q9BQY4 288 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 RSG1Q9BU20 258 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 CHMP4BQ9H444 224 aaKnown RBP2.92□□□□□ -1.94
LSM5-209ENST00000468872 HAUS4Q9H6D7 363 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 OR51B2Q9Y5P1 312 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 KPTNQ9Y664 436 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 DDX60LQ5H9U9 1706 aaKnown RBP2.92□□□□□ -1.94
LSM5-209ENST00000468872 PIK3C2GO75747 1445 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 RIC1Q4ADV7 1423 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 SCN7AQ01118 1682 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 F8P00451 2351 aa2.92□□□□□ -1.94
LSM5-209ENST00000468872 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 A0A0B4J2E0 115 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 A0A1W2PPV4 95 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 NPPAP01160 153 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 MBP02144 154 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 CD74P04233 296 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 ZNF286BP0CG31 522 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 ME2P23368 584 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 PMELP40967 661 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 PAFAH1B2P68402 229 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 ZNF816Q0VGE8 651 aaPredicted RBP2.91□□□□□ -1.94
LSM5-209ENST00000468872 OR1Q1Q15612 314 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 OR2W3Q7Z3T1 314 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 WDR31Q8NA23 367 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 SPERTQ8NA61 448 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 OR4M1Q8NGD0 313 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 OR8D1Q8WZ84 308 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 SLC25A46Q96AG3 418 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 LRRC39Q96DD0 335 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 RBFOX1Q9NWB1 397 aaKnown RBP2.91□□□□□ -1.94
LSM5-209ENST00000468872 ADA2Q9NZK5 511 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 GGA2Q9UJY4 613 aa2.91□□□□□ -1.94
LSM5-209ENST00000468872 CES1P1Q9UKY3 287 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms