RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 AVPI1Q5T686 147 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 NTN3O00634 580 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 CER1O95813 267 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 ACKR3P25106 362 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 CD80P33681 288 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 OPRM1P35372 400 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 RGS19P49795 217 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 TMEM33P57088 247 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 OPN5Q6U736 354 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 PLXDC2Q6UX71 529 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 TOMM40LQ969M1 308 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 OR51M1Q9H341 326 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 LIME1Q9H400 295 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 DCAF16Q9NXF7 216 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF581Q9P0T4 197 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 AK3Q9UIJ7 227 aa13.75□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF850A8MQ14 1090 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 JTBO76095 146 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 LY86O95711 162 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 FCGR3AP08637 254 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 LIFP15018 202 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 IL11RAQ14626 422 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 FAM76BQ5HYJ3 339 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 TCEAL6Q6IPX3 200 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 Q6ZRG5 221 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 ZIC4Q8N9L1 334 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 CCDC54Q8NEL0 328 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 MR1Q95460 341 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 PARP11Q9NR21 331 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 DKKL1Q9UK85 242 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 AMDHD2Q9Y303 409 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 TXNL1O43396 289 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 ZIC3O60481 467 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF205O95201 554 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 CD5P06127 495 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 DSCR4P56555 118 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 PRSS12P56730 875 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 PIGPP57054 158 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 SP6Q3SY56 376 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 AGBL5Q8NDL9 886 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 SULT4A1Q9BR01 284 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 ANGPTL4Q9BY76 406 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 DECR2Q9NUI1 292 aa13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 FOXD3Q9UJU5 478 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-211ENST00000468468 C9JQL5 133 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 TNFSF11O14788 317 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 GAPDHP04406 335 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 F2RL1P55085 397 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 DMBX1Q8NFW5 382 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 A0A0J9YW62 118 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 HEXAP06865 529 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 HABP2Q14520 560 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 CLEC9AQ6UXN8 241 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 C20orf196Q8IYI0 205 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 TMEM105Q8N8V8 129 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 SPSB1Q96BD6 273 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 REEP6Q96HR9 211 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 PROK2Q9HC23 129 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 NECAP2Q9NVZ3 263 aa13.73□□□□□ -0.21
TSPAN4-211ENST00000468468 IGKV1-27A0A075B6S5 117 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 UMODP07911 640 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 ZNF728P0DKX0 622 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 MRPS34P82930 218 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 PEA15Q15121 130 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 DMRTC2Q8IXT2 367 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 ERGIC1Q969X5 290 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 KIRREL1Q96J84 757 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 PARP12Q9H0J9 701 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 PTRH2Q9Y3E5 179 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 FREM2Q5SZK8 3169 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 IGHV1-45A0A0A0MS14 117 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 MASP2O00187 686 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 SSTP61278 116 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 BRICD5Q6PL45 260 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 NAXEQ8NCW5 288 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 DYRK2Q92630 601 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 PLEKHA2Q9HB19 425 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 NXT1Q9UKK6 140 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 HSF4Q9ULV5 492 aa13.72□□□□□ -0.21
TSPAN4-211ENST00000468468 LOC102723996A0A087X1L8 192 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 MBPP02686 304 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 CRYGSP22914 178 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 S100PP25815 95 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 DUSP3P51452 185 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 SUCLG1P53597 346 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 DVL1P1P54792 670 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 FXYD4P59646 89 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 FAM3AP98173 230 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 TSC22D1Q15714 1073 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 AKIRIN2Q53H80 203 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms