RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NCS1P62166 190 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 ASAH1Q13510 395 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 DAZAP2Q15038 168 aaPredicted RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 ADIPOQQ15848 244 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 SP5Q6BEB4 398 aaPredicted RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 UNQ9370/PRO34162Q6UXP9 181 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 C17orf107Q6ZR85 190 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 C12orf45Q8N5I9 185 aaPredicted RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 GDPD1Q8N9F7 314 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 SYNPRQ8TBG9 265 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 HAVCR1Q96D42 359 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 C14orf144Q96I85 54 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 MRPL37Q9BZE1 423 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 PPP1R3EQ9H7J1 279 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF442Q9H7R0 627 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 CISD1Q9NZ45 108 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 MYEF2Q9P2K5 600 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 CMAHPQ9Y471 501 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 IGLV3-9A0A075B6K5 115 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 hCG_1807616A0A1W2PRN6 198 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 SHISA3A0PJX4 238 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 C9orf170A2RU37 121 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 UCHL1P09936 223 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 OR4A8P0C604 315 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF20P17024 532 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 COL8A1P27658 744 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 HLA-DMAP28067 261 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF672Q499Z4 452 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 C9orf152Q5JTZ5 239 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 RAB12Q6IQ22 244 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 GDPGP1Q6ZNW5 385 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 TPRA1Q86W33 373 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 SERPINA12Q8IW75 414 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 PARP16Q8N5Y8 322 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 Q8NFD4 153 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 MRPL24Q96A35 216 aaKnown RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 MS4A7Q9GZW8 240 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 SDHAF2Q9NX18 166 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 ADAM30Q9UKF2 790 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 RHBDD3Q9Y3P4 386 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 PEX16Q9Y5Y5 336 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 RAI1Q7Z5J4 1906 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 USF3Q68DE3 2245 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 TRAV8-7A0A075B6U6 113 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF816-ZNF321PA0A0X1KG74 233 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 IQCF6A8MYZ5 107 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 TIMM8AO60220 97 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 LY86O95711 162 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 RAF1P04049 648 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 SRMP19623 302 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 KITLGP21583 273 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 PAMR1Q6UXH9 720 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 FTMTQ8N4E7 242 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 CCDC54Q8NEL0 328 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 OR51A2Q8NGJ7 313 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 OR13C9Q8NGT0 318 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 MCFD2Q8NI22 146 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 PIGCQ92535 297 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 THRSPQ92748 146 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 DVL3Q92997 716 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 C10orf35Q96D05 121 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 NARS2Q96I59 477 aaKnown RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 CHST5Q9GZS9 411 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 PLK3Q9H4B4 646 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 SEBOXQ9HB31 216 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 TAS2R4Q9NYW5 299 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 GSTK1Q9Y2Q3 226 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 HECTD1Q9ULT8 2610 aa5.86□□□□□ -1.47
SCAF4-204ENST00000467731 MAP1AP78559 2803 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF850A8MQ14 1090 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 ARL6IP5O75915 188 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 IGHV3-13P01766 116 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 MAS1P04201 325 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 COX6B1P14854 86 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 SELEP16581 610 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 APOBEC3AP31941 199 aaPredicted RBP5.85□□□□□ -1.47
SCAF4-204ENST00000467731 SELENOVP59797 346 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 UBE2V2Q15819 145 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 DDI2Q5TDH0 399 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 REC114Q7Z4M0 266 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 NRARPQ7Z6K4 114 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 CSNK2A3Q8NEV1 391 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 OR5D14Q8NGL3 314 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 UBASH3BQ8TF42 649 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 PP6455Q8WZ26 134 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 PHYHIPQ92561 330 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 KCTD7Q96MP8 289 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 UBQLN2Q9UHD9 624 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 GPR160Q9UJ42 338 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 A3GALT2U3KPV4 340 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 APCP25054 2843 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 RFPL4AA6NLU0 287 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 RFPL4AL1F8VTS6 287 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 NRASP01111 189 aa5.85□□□□□ -1.47
SCAF4-204ENST00000467731 IGFBP3P17936 291 aaPredicted RBP5.85□□□□□ -1.47
SCAF4-204ENST00000467731 FSTP19883 344 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms