RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 MRGPRDQ8TDS7 321 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 TMEM171Q8WVE6 324 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 RNF2Q99496 336 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 AUNIPQ9H7T9 357 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 IGHV1OR21-1A0A087WYE8 117 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 IGHV5-51A0A0C4DH38 117 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 TMEM127O75204 238 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 ID1P41134 155 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 LIMS2Q7Z4I7 341 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 GLCCI1Q86VQ1 547 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 PRSS3P2Q8NHM4 247 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 MZB1Q8WU39 189 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 C19orf43Q9BQ61 176 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 LHX9Q9NQ69 397 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 MBD1Q9UIS9 605 aaPredicted RBP7.75□□□□□ -1.17
HPS4-209ENST00000466781 ERRFI1Q9UJM3 462 aaPredicted RBP7.75□□□□□ -1.17
HPS4-209ENST00000466781 AUP1Q9Y679 476 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 MCM3APO60318 1980 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 BCL2L11O43521 198 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 OPN1MWP04001 364 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 OPN1MW2P0DN77 364 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 OPN1MW3P0DN78 364 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 SPINK14Q6IE38 97 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 ADTRPQ96IZ2 230 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 PLXNA1Q9UIW2 1896 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TRBV23-1A0A0A0MS06 115 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TRAV1-2A0A0B4J238 106 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 A0A1B0GTQ1 180 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 J3KRW8 73 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 GPX5O75715 221 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 CST7O76096 145 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 CCL2P13500 99 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 CALCRP30988 508 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 GALNSP34059 522 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 HERVK_113P61574 105 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TMEM179BQ7Z7N9 219 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 MED30Q96HR3 178 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 SAP30LQ9HAJ7 183 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 PRDM6Q9NQX0 595 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TREM2Q9NZC2 230 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 UCNP55089 124 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 SPCS3P61009 180 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 OR4C16Q8NGL9 310 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 RFESDQ8TAC1 157 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 VSTM2AQ8TAG5 236 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 ZNF596Q8TC21 504 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 MS4A7Q9GZW8 240 aaPredicted RBP7.74□□□□□ -1.17
HPS4-209ENST00000466781 SLC7A10Q9NS82 523 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 PLEKHB1Q9UF11 243 aaPredicted RBP7.74□□□□□ -1.17
HPS4-209ENST00000466781 C3orf85A0A1B0GTC6 90 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 MASP2O00187 686 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 MGPP08493 103 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 PSMB2P49721 201 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 HNRNPA3P51991 378 aaKnown RBP7.74□□□□□ -1.17
HPS4-209ENST00000466781 STARD6P59095 220 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 B4GALNT1Q00973 533 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TMEM128Q5BJH2 165 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 FDX2Q6P4F2 183 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 COMMD1Q8N668 190 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 ZNF441Q8N8Z8 693 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 CNRIP1Q96F85 164 aaPredicted RBP7.74□□□□□ -1.17
HPS4-209ENST00000466781 HEXA-AS1Q9H8Q6 139 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 CA10Q9NS85 328 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 C20orf141Q9NUB4 165 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 PCOLCE2Q9UKZ9 415 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 GNG7O60262 68 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 ETHE1O95571 254 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 GABRB1P18505 474 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 GALR1P47211 349 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 C21orf58P58505 322 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 KISS1Q15726 138 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 MOGAT2Q3SYC2 334 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 C20orf196Q8IYI0 205 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TMEM116Q8NCL8 245 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 OR4S2Q8NH73 311 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 SLC25A40Q8TBP6 338 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 FGF20Q9NP95 211 aaPredicted RBP7.74□□□□□ -1.17
HPS4-209ENST00000466781 SLC25A37Q9NYZ2 338 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 CCL21O00585 134 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 KLK8O60259 260 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 GUCA2AQ02747 115 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 PMS2CLQ68D20 193 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 VWA1Q6PCB0 445 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 PDPNQ86YL7 162 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 TEX29Q8N6K0 151 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 ASB5Q8WWX0 329 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 ZNF764Q96H86 408 aaPredicted RBP7.74□□□□□ -1.17
HPS4-209ENST00000466781 C10orf90Q96M02 699 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 RAB40CQ96S21 281 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 NPAS1Q99742 590 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 SPNS1Q9H2V7 528 aa7.74□□□□□ -1.17
HPS4-209ENST00000466781 KIF13BQ9NQT8 1826 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 MEX3AA1L020 520 aaKnown RBP7.73□□□□□ -1.17
HPS4-209ENST00000466781 HMX2A2RU54 273 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 ACTL6AO96019 429 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 SLC25A1P53007 311 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 CLPPQ16740 277 aaPredicted RBP7.73□□□□□ -1.17
HPS4-209ENST00000466781 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 BAP18Q8IXM2 172 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 FADS6Q8N9I5 356 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms