RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SSX6Q7RTT6 188 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 TRAPPC6BQ86SZ2 158 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 CATSPERDQ86XM0 798 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 C11orf44Q8N8P7 122 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 CENPNQ96H22 339 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-206ENST00000466591 OAZ3Q9UMX2 235 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 LOC107986453A0A1B0GWG9 222 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 hADV38S2A0JD32 116 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 SNTNA6NMZ2 147 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 K7N7A8 449 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 ZNF728P0DKX0 622 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 CCL1P22362 96 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 MPZP25189 248 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 RBP2P50120 134 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 ATP1B3P54709 279 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 SNU13P55769 128 aaKnown RBP14.25□□□□□ -0.13
COL7A1-206ENST00000466591 OR12D2P58182 307 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 TMED1Q13445 227 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 AANATQ16613 207 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 TP53I3Q53FA7 332 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 HCP5Q6MZN7 132 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 Q8IYB0 196 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 ENTHD1Q8IYW4 607 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 PPP1R35Q8TAP8 253 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 PP6455Q8WZ26 134 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 MRPL48Q96GC5 212 aaKnown RBP14.25□□□□□ -0.13
COL7A1-206ENST00000466591 ZNF714Q96N38 554 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 CHST5Q9GZS9 411 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 MEGF9Q9H1U4 602 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 RANBP3Q9H6Z4 567 aaPredicted RBP14.25□□□□□ -0.13
COL7A1-206ENST00000466591 HES4Q9HCC6 221 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 SIGLEC9Q9Y336 463 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 PCDHGB5Q9Y5G0 923 aa14.25□□□□□ -0.13
COL7A1-206ENST00000466591 DAPL1A0PJW8 107 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 PEX2P28328 305 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 ACTC1P68032 377 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 ACTA1P68133 377 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 GRK1Q15835 563 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 KLHDC1Q8N7A1 406 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 NDNFQ8TB73 568 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 RPS4Y2Q8TD47 263 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 C10orf35Q96D05 121 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 MYCBPQ99417 103 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-206ENST00000466591 GABARAPL3Q9BY60 117 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 NEK6Q9HC98 313 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 PITPNC1Q9UKF7 332 aa14.24□□□□□ -0.13
COL7A1-206ENST00000466591 TBL2Q9Y4P3 447 aaKnown RBP14.24□□□□□ -0.13
COL7A1-206ENST00000466591 MEGF8Q7Z7M0 2845 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 F2RL2O00254 374 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 HAND1O96004 215 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 PRKACBP22694 351 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 KIR2DS4P43632 304 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 MTCP1P56278 107 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 EFNB1P98172 346 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 UBE2V2Q15819 145 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 SSX2Q16385 188 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 TMEM244Q5VVB8 128 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 C1QL4Q86Z23 238 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 OR8H2Q8N162 312 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 ZNF676Q8N7Q3 588 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 CAPSLQ8WWF8 208 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 EME1Q96AY2 570 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 SNX22Q96L94 193 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 OSBPL10Q9BXB5 764 aa14.23□□□□□ -0.13
COL7A1-206ENST00000466591 PRKACAP17612 351 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 POLR2IP36954 125 aaKnown RBP14.22□□□□□ -0.13
COL7A1-206ENST00000466591 SLC34A1Q06495 639 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 LHFPL4Q7Z7J7 247 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 RNFT2Q96EX2 444 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 CHST6Q9GZX3 395 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 MTCH1Q9NZJ7 389 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 FOXJ3Q9UPW0 622 aa14.22□□□□□ -0.13
COL7A1-206ENST00000466591 TET2Q6N021 2002 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-206ENST00000466591 C17orf98A8MV24 154 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 RBP4P02753 201 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 HTR1AP08908 422 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 IGHV1-8P0DP01 117 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 ERVK11-1P61568 191 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 ACTA2P62736 377 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 ACTG2P63267 376 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 MEF2CQ06413 473 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-206ENST00000466591 ZBTB49Q6ZSB9 765 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 LHFPL2Q6ZUX7 228 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 RDH10Q8IZV5 341 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 FAM58AQ8N1B3 248 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 PRSS35Q8N3Z0 413 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 OR13C3Q8NGS6 347 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 TRUB1Q8WWH5 349 aaKnown RBP14.21□□□□□ -0.13
COL7A1-206ENST00000466591 PYDC1Q8WXC3 89 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 FGGYQ96C11 551 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 MALSU1Q96EH3 234 aa14.21□□□□□ -0.13
COL7A1-206ENST00000466591 PKD1L1Q8TDX9 2849 aa14.21□□□□□ -0.14
COL7A1-206ENST00000466591 TRRAPQ9Y4A5 3859 aa14.21□□□□□ -0.14
COL7A1-206ENST00000466591 FUOMA2VDF0 154 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 F8VVB4 439 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 F8VWA3 439 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 CALCBP10092 127 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 BCL3P20749 454 aa14.2□□□□□ -0.14
COL7A1-206ENST00000466591 AZGP1P25311 298 aaKnown RBP14.2□□□□□ -0.14
COL7A1-206ENST00000466591 DUSP1P28562 367 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms