RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 LIPKQ5VXJ0 399 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 ZNF529Q6P280 563 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 SLC36A1Q7Z2H8 476 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 C1QL2Q7Z5L3 287 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 TMEM185AQ8NFB2 350 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 H1FXQ92522 213 aaKnown RBP9.66□□□□□ -0.86
CUX1-207ENST00000465461 EMG1Q92979 244 aaKnown RBP9.66□□□□□ -0.86
CUX1-207ENST00000465461 TMEM203Q969S6 136 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 DACT3Q96B18 629 aaPredicted RBP9.66□□□□□ -0.86
CUX1-207ENST00000465461 DOCK11Q5JSL3 2073 aa9.66□□□□□ -0.86
CUX1-207ENST00000465461 TRBV5-7A0A0A0MS05 114 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 KIR2DS1A0A191URI9 304 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 ZNF879B4DU55 563 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 GABRPO00591 440 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 SIGLEC5O15389 551 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 RGS9O75916 674 aaPredicted RBP9.65□□□□□ -0.86
CUX1-207ENST00000465461 MAS1P04201 325 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 SFTPBP07988 381 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 NDUFB7P17568 137 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 PRKACAP17612 351 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 IGFBP3P17936 291 aaPredicted RBP9.65□□□□□ -0.86
CUX1-207ENST00000465461 HNF1AP20823 631 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 CPT2P23786 658 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 TGFBR2P37173 567 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 OR3A4PP47883 348 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 NPY4RP50391 375 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 CAPZA1P52907 286 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 RPS25P62851 125 aaKnown RBP9.65□□□□□ -0.86
CUX1-207ENST00000465461 IL13RA1P78552 427 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 BDH1Q02338 343 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 COL10A1Q03692 680 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 PRB3Q04118 309 aaPredicted RBP9.65□□□□□ -0.86
CUX1-207ENST00000465461 PAX8Q06710 450 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 PDCD1Q15116 288 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 LRRC10Q5BKY1 277 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 FAM27D1Q5T7N8 215 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 BTNL3Q6UXE8 466 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 MKXQ8IYA7 352 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 OR10K1Q8NGX5 313 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 DERL3Q96Q80 235 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 GPER1Q99527 375 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 NOX4Q9NPH5 578 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 SLC25A10Q9UBX3 287 aaPredicted RBP9.65□□□□□ -0.86
CUX1-207ENST00000465461 LPAR3Q9UBY5 353 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 SOX21Q9Y651 276 aaPredicted RBP9.65□□□□□ -0.86
CUX1-207ENST00000465461 AUP1Q9Y679 476 aa9.65□□□□□ -0.86
CUX1-207ENST00000465461 WNK2Q9Y3S1 2297 aa9.65□□□□□ -0.87
CUX1-207ENST00000465461 NSD1Q96L73 2696 aaPredicted RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 PPIAL4CA0A0B4J2A2 164 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 MEX3AA1L020 520 aaKnown RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 J3QLI3 93 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 MAGEB3O15480 346 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 ALX3O95076 343 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 CDRT1O95170 752 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 CYB5AP00167 134 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 KNG1P01042 644 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 CD1AP06126 327 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 FAM157CP0CG43 387 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 PCMT1P22061 227 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 GATA3P23771 443 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 BDKRB2P30411 391 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 DLX1P56177 255 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 FGF12P61328 243 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 ARF6P62330 175 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 PPP3R1P63098 170 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 EMX1Q04741 257 aaPredicted RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 ACSM3Q53FZ2 586 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 KLF17Q5JT82 389 aaPredicted RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 DDI2Q5TDH0 399 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 METAP1DQ6UB28 335 aaPredicted RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 FAM58AQ8N1B3 248 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 OR4M1Q8NGD0 313 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 TNFAIP8L1Q8WVP5 186 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 C22orf15Q8WYQ4 148 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 UFD1Q92890 307 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 SDSLQ96GA7 329 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 MED30Q96HR3 178 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 MGLLQ99685 303 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 MRI1Q9BV20 369 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 FAM192AQ9GZU8 254 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 PPIL3Q9H2H8 161 aaKnown RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 ACOT13Q9NPJ3 140 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 RPUSD1Q9UJJ7 312 aaKnown RBP9.64□□□□□ -0.87
CUX1-207ENST00000465461 BLOC1S6Q9UL45 172 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 ING4Q9UNL4 249 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 GSTK1Q9Y2Q3 226 aa9.64□□□□□ -0.87
CUX1-207ENST00000465461 ENSAO43768 121 aaKnown RBP9.63□□□□□ -0.87
CUX1-207ENST00000465461 KDM4BO94953 1096 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 HAND1O96004 215 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 PPIAL4GP0DN37 164 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 IGHV4-38-2P0DP08 117 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 ZNF93P35789 620 aaPredicted RBP9.63□□□□□ -0.87
CUX1-207ENST00000465461 GABARAPL2P60520 117 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 CD276Q5ZPR3 534 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 UNQ9370/PRO34162Q6UXP9 181 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 CEACAM19Q7Z692 300 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 SPARTQ8N0X7 666 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 NR1H4Q96RI1 486 aaPredicted RBP9.63□□□□□ -0.87
CUX1-207ENST00000465461 PCGF1Q9BSM1 259 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms