RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 ISG20L2Q9H9L3 353 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 GLS2Q9UI32 602 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 DIMT1Q9UNQ2 313 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 EXOSC1Q9Y3B2 195 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 IGKV1-9A0A0C4DH69 117 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 A0A1W2PQ09 198 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 K7N7A8 449 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 ZFPL1O95159 310 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 TK1P04183 234 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 OCM2P0CE71 109 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 OCMP0CE72 109 aaPredicted RBP13.37□□□□□ -0.27
SSNA1-204ENST00000464553 AZGP1P25311 298 aaKnown RBP13.37□□□□□ -0.27
SSNA1-204ENST00000464553 CAPZA1P52907 286 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 RPL31P62899 125 aaKnown RBP13.37□□□□□ -0.27
SSNA1-204ENST00000464553 ACSM1Q08AH1 577 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 PDZK1IP1Q13113 114 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 SLC25A26Q70HW3 274 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 FGFRL1Q8N441 504 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 TNFRSF14Q92956 283 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 CPNE2Q96FN4 548 aaPredicted RBP13.37□□□□□ -0.27
SSNA1-204ENST00000464553 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
SSNA1-204ENST00000464553 OPALINQ96PE5 141 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 ZCCHC4Q9H5U6 513 aa13.37□□□□□ -0.27
SSNA1-204ENST00000464553 CHCHD3Q9NX63 227 aaKnown RBP13.37□□□□□ -0.27
SSNA1-204ENST00000464553 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 H3BSH0 61 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 PIPP12273 146 aaPredicted RBP13.36□□□□□ -0.27
SSNA1-204ENST00000464553 MYL12AP19105 171 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 PEX2P28328 305 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 CAPGP40121 348 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 GABPB1Q06547 395 aaPredicted RBP13.36□□□□□ -0.27
SSNA1-204ENST00000464553 ZNF146Q15072 292 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 SMN1Q16637 294 aaKnown RBP13.36□□□□□ -0.27
SSNA1-204ENST00000464553 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 LDLRAD3Q86YD5 345 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 C8orf59Q8N0T1 100 aaPredicted RBP13.36□□□□□ -0.27
SSNA1-204ENST00000464553 ZSCAN4Q8NAM6 433 aaPredicted RBP13.36□□□□□ -0.27
SSNA1-204ENST00000464553 RPS4Y2Q8TD47 263 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 SNX22Q96L94 193 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 HEXA-AS1Q9H8Q6 139 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 PLCXD1Q9NUJ7 323 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 BABAM2Q9NXR7 383 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 SF3B6Q9Y3B4 125 aaKnown RBP13.36□□□□□ -0.27
SSNA1-204ENST00000464553 FAM96BQ9Y3D0 163 aa13.36□□□□□ -0.27
SSNA1-204ENST00000464553 EFCAB10A6NFE3 127 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 POM121CA8CG34 1229 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 H0YJX3 145 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 OGG1O15527 345 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 RBP4P02753 201 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 FBP1P09467 338 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 MEF2CQ06413 473 aaPredicted RBP13.35□□□□□ -0.27
SSNA1-204ENST00000464553 MIDNQ504T8 468 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 TMEM200BQ69YZ2 307 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 FAM58AQ8N1B3 248 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 OR51A4Q8NGJ6 313 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 OR52N1Q8NH53 320 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 PPP1R35Q8TAP8 253 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 CNIH3Q8TBE1 160 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 TMEM80Q96HE8 168 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 DPAGT1Q9H3H5 408 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 CNOT2Q9NZN8 540 aaKnown RBP13.35□□□□□ -0.27
SSNA1-204ENST00000464553 OR14J1Q9UGF5 321 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 DHDHQ9UQ10 334 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 PCDHGB5Q9Y5G0 923 aa13.35□□□□□ -0.27
SSNA1-204ENST00000464553 A0A1B0GUS0 222 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 E9PI62 339 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 RNASEK-C17orf49H0YIS7 233 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 HOXA3O43365 443 aaPredicted RBP13.34□□□□□ -0.27
SSNA1-204ENST00000464553 SULT1B1O43704 296 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 ZNF737O75373 536 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 TFF1P04155 84 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 CD2P06729 351 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 MELTFP08582 738 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 ETV1P50549 477 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 BMXP51813 675 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 RUSC1-AS1Q66K80 236 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 FAM185AQ8N0U4 392 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 OR10AC1Q8NH08 325 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 GPR148Q8TDV2 347 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 FBLIM1Q8WUP2 373 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 EMG1Q92979 244 aaKnown RBP13.34□□□□□ -0.27
SSNA1-204ENST00000464553 SLAMF9Q96A28 289 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 PDCD1LG2Q9BQ51 273 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 HMG20AQ9NP66 347 aa13.34□□□□□ -0.27
SSNA1-204ENST00000464553 SOX21Q9Y651 276 aaPredicted RBP13.34□□□□□ -0.27
SSNA1-204ENST00000464553 F8VVB4 439 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 F8VWA3 439 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 SH2D1BO14796 132 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 NPFFO15130 113 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 KDM4BO94953 1096 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 CLIC3O95833 236 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 CFPP27918 469 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 IER3P46695 156 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 COL10A1Q03692 680 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 SLC34A1Q06495 639 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 CDK5R1Q15078 307 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 ZNF529Q6P280 563 aa13.33□□□□□ -0.28
SSNA1-204ENST00000464553 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms