RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 C1orf64Q8NEQ6 169 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 OR51Q1Q8NH59 317 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 PHF10Q8WUB8 498 aaKnown RBP2.13□□□□□ -2.07
CLK1-208ENST00000464454 YIPF5Q969M3 257 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 MSANTD3Q96H12 275 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 ADTRPQ96IZ2 230 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 QKIQ96PU8 341 aaKnown RBP eCLIP2.13□□□□□ -2.07
CLK1-208ENST00000464454 CIB1Q99828 191 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 COPS4Q9BT78 406 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 BEX2Q9BXY8 128 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 SHCBP1LQ9BZQ2 653 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 TSGA10Q9BZW7 698 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 PORCNQ9H237 461 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 LHX5Q9H2C1 402 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 XKR8Q9H6D3 395 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 RDH14Q9HBH5 336 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 ACOT13Q9NPJ3 140 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 NLE1Q9NVX2 485 aaPredicted RBP2.13□□□□□ -2.07
CLK1-208ENST00000464454 KLF13Q9Y2Y9 288 aaPredicted RBP2.13□□□□□ -2.07
CLK1-208ENST00000464454 INSIG2Q9Y5U4 225 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 SEC16AO15027 2179 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 IZUMO1RA6ND01 250 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 BOLA2-SMG1P6H3BVE0 249 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 PSMD11O00231 422 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 DHRS3O75911 302 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 OR2A4O95047 310 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 CXorf1O96002 111 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 TPM1P09493 284 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 TAC1P20366 129 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 STX4Q12846 297 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 CLLU1OSQ5K130 101 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 RESP18Q5W5W9 173 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 FAHD1Q6P587 224 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 FAM131AQ6UXB0 335 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 ST13P4Q8IZP2 240 aaPredicted RBP2.12□□□□□ -2.07
CLK1-208ENST00000464454 LINC00337Q8N6G1 96 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 TRIML2Q8N7C3 387 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 OR5H2Q8NGV7 314 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 UBA3Q8TBC4 463 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 C22orf15Q8WYQ4 148 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 OR2A7Q96R45 310 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 PEBP4Q96S96 227 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 THTPAQ9BU02 230 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 HINT2Q9BX68 163 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 HAUS4Q9H6D7 363 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 OR2S2Q9NQN1 319 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 SDHAF3Q9NRP4 125 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 SHANK1Q9Y566 2161 aa2.12□□□□□ -2.07
CLK1-208ENST00000464454 MIA3Q5JRA6 1907 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 OR2AT4A6NND4 320 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 UPK2O00526 184 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 RGS5O15539 181 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 KCNK2O95069 426 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 CD8AP01732 235 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 RLN2P04090 185 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 CDK1P06493 297 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 TEAD1P28347 426 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 SLC6A1P30531 599 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 RANBP1P43487 201 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 XKP51811 444 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 PRKCDQ05655 676 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 C18orf21Q32NC0 220 aaPredicted RBP2.11□□□□□ -2.07
CLK1-208ENST00000464454 ACTL10Q5JWF8 245 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 CLEC12AQ5QGZ9 265 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 AADACL4Q5VUY2 407 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 PRNTQ86SH4 94 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 CYP4Z1Q86W10 505 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 GAPTQ8N292 157 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 ZNF555Q8NEP9 628 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 OR8A1Q8NGG7 326 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 OR4D6Q8NGJ1 314 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 ITLN2Q8WWU7 325 aaPredicted RBP2.11□□□□□ -2.07
CLK1-208ENST00000464454 SHANK2-AS3Q9BTD1 123 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 ANGPTL4Q9BY76 406 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 SRRQ9GZT4 340 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 RAB1BQ9H0U4 201 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 ASB7Q9H672 318 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 FAM60AQ9NP50 221 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 ZNF302Q9NR11 478 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 TAC3Q9UHF0 121 aa2.11□□□□□ -2.07
CLK1-208ENST00000464454 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 LOC389332A0A1B0GUA5 103 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 GMNCA6NCL1 334 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 VGLL3A8MV65 326 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 ENSAO43768 121 aaKnown RBP2.1□□□□□ -2.07
CLK1-208ENST00000464454 SLC37A4O43826 429 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 FSTL3O95633 263 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 GIMD1P0DJR0 217 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 ETV1P50549 477 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 TNNC1P63316 161 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 C2orf80Q0P641 193 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 GUSBP1Q15486 140 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 SSX1Q16384 188 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 ZNF404Q494X3 552 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 FA2HQ7L5A8 372 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 RBM45Q8IUH3 476 aaKnown RBP2.1□□□□□ -2.07
CLK1-208ENST00000464454 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 PPP1R36Q96LQ0 422 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 NXF2Q9GZY0 626 aaKnown RBP2.1□□□□□ -2.07
CLK1-208ENST00000464454 TMEM38BQ9NVV0 291 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms