RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 OR3A3P47888 321 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 MTCP1P56278 107 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 SRSF4Q08170 494 aaKnown RBP12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
COL5A1-205ENST00000464187 TMEM42Q69YG0 159 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 LPCAT3Q6P1A2 487 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF474Q6S9Z5 364 aaPredicted RBP12.5□□□□□ -0.41
COL5A1-205ENST00000464187 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CCDC36Q8IYA8 594 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 ARRDC1Q8N5I2 433 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 BOD1Q96IK1 185 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 Q96M66 194 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 KCNN3Q9UGI6 736 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 MAB21L2Q9Y586 359 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 AUP1Q9Y679 476 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 TRGV8A0A0C4DH27 118 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 FAM230AA0A1W2PPH8 454 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 C5orf49A4QMS7 147 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 RFPL4AA6NLU0 287 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 RFPL4AL1F8VTS6 287 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 HOXC12P31275 282 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 S100A11P31949 105 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 FAM3AP98173 230 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF92Q03936 586 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 HLXQ14774 488 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-205ENST00000464187 CLLU1Q5K131 121 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 LIN54Q6MZP7 749 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 OR5H2Q8NGV7 314 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 MITD1Q8WV92 249 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF629Q9UEG4 869 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF391Q9UJN7 358 aa12.49□□□□□ -0.41
COL5A1-205ENST00000464187 SERPINE3A8MV23 424 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 SPRY1O43609 319 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-205ENST00000464187 ANGPTL7O43827 346 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 TMEM225BP0DP42 221 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-205ENST00000464187 AKR1C4P17516 323 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 PRKACBP22694 351 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 CASP6P55212 293 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 GMFBP60983 142 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 IL13RA1P78552 427 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 LHFPL2Q6ZUX7 228 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 TERB2Q8NHR7 220 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 PCNPQ8WW12 178 aaKnown RBP12.48□□□□□ -0.41
COL5A1-205ENST00000464187 POM121L2Q96KW2 1035 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF75AQ96N20 296 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 VKORC1Q9BQB6 163 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 RGCCQ9H4X1 137 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 CEACAM18A8MTB9 384 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 A8MXE2 369 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 EEF1E1-BLOC1S5C9J1V9 151 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 MSTNO14793 375 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 CA11O75493 328 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 NRASP01111 189 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 SERPINA5P05154 406 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 RPA2P15927 270 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 HLA-GP17693 338 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 GABRR1P24046 479 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 OR8B8Q15620 311 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 BHLHA15Q7RTS1 189 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-205ENST00000464187 C6orf201Q7Z4U5 140 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 LHFPL1Q86WI0 220 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 C17orf78Q8N4C9 275 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 OR13G1Q8NGZ3 307 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 MAFIPQ8WZ33 124 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 CPNE2Q96FN4 548 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-205ENST00000464187 PHB2Q99623 299 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 METTL9Q9H1A3 318 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 PIGMQ9H3S5 423 aa12.48□□□□□ -0.41
COL5A1-205ENST00000464187 XRCC2O43543 280 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 RP2O75695 350 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 HTR3BO95264 441 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 PLATP00750 562 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 VAMP1P23763 118 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 APLNRP35414 380 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 RBP2P50120 134 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 NPY4RP50391 375 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
COL5A1-205ENST00000464187 TAS2R31P59538 309 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 RSU1Q15404 277 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 ESCO2Q56NI9 601 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 COLCA1Q6ZS62 124 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 WDR31Q8NA23 367 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 CASTOR1Q8WTX7 329 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 RND1Q92730 232 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 BORCS8Q96FH0 119 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 WBP1Q96G27 269 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 DMRTA2Q96SC8 542 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 GPR132Q9UNW8 380 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 OSGIN2Q9Y236 505 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 MEMO1Q9Y316 297 aa12.47□□□□□ -0.41
COL5A1-205ENST00000464187 POLEQ07864 2286 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms