RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 CD28P10747 220 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 VDAC2P45880 294 aaPredicted RBP12.43□□□□□ -0.42
SKA3-204ENST00000462482 FUT6P51993 359 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
SKA3-204ENST00000462482 MINOS1Q5TGZ0 78 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 NXNL2Q5VZ03 156 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 ZNF626Q68DY1 528 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 PLEKHG7Q6ZR37 379 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 ZBTB49Q6ZSB9 765 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 TMEM219Q86XT9 240 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 EGFL6Q8IUX8 553 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 ENTHD1Q8IYW4 607 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 OR8H2Q8N162 312 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 Q8N2B8 174 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 ZNF676Q8N7Q3 588 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 TCEANCQ8N8B7 351 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 CCDC54Q8NEL0 328 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 TMEM163Q8TC26 289 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 SNX22Q96L94 193 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 OR5M11Q96RB7 305 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 KRT84Q9NSB2 600 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 SERTAD4Q9NUC0 356 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 NECAP2Q9NVZ3 263 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 ENOPH1Q9UHY7 261 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 GLS2Q9UI32 602 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 MINOS1-NBL1R4GNA1 71 aa12.43□□□□□ -0.42
SKA3-204ENST00000462482 A0A1B0GTI1 187 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 MEGF11A6BM72 1044 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ODF3BA8MYP8 253 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 MAGEB4O15481 346 aaPredicted RBP12.42□□□□□ -0.42
SKA3-204ENST00000462482 SRSF10O75494 262 aaKnown RBP12.42□□□□□ -0.42
SKA3-204ENST00000462482 INMTO95050 263 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 GABRR1P24046 479 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 AZGP1P25311 298 aaKnown RBP12.42□□□□□ -0.42
SKA3-204ENST00000462482 PEX2P28328 305 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ATP6V1E1P36543 226 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 DYNLT3P51808 116 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 DLX6P56179 175 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ACTA2P62736 377 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ACTG2P63267 376 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ACTC1P68032 377 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ACTA1P68133 377 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 IL18R1Q13478 541 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ODF4Q2M2E3 257 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 FAHD1Q6P587 224 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 Q8IYB0 196 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 DYNAPQ8N1N2 210 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 EMG1Q92979 244 aaKnown RBP12.42□□□□□ -0.42
SKA3-204ENST00000462482 BORCS8Q96FH0 119 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 AKR1E2Q96JD6 320 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 MMP28Q9H239 520 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 ADGRL4Q9HBW9 690 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 MRM2Q9UI43 246 aaKnown RBP12.42□□□□□ -0.42
SKA3-204ENST00000462482 ZNF281Q9Y2X9 895 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 HILPDAQ9Y5L2 63 aa12.42□□□□□ -0.42
SKA3-204ENST00000462482 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
SKA3-204ENST00000462482 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
SKA3-204ENST00000462482 ZNF737O75373 536 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 CCL1P22362 96 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 DAPP51397 102 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 LOXL3P58215 753 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 GRK1Q15835 563 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 AADACL4Q5VUY2 407 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 Q6ZPA2 131 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 BCDIN3DQ7Z5W3 292 aaKnown RBP12.41□□□□□ -0.42
SKA3-204ENST00000462482 TRAPPC6BQ86SZ2 158 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 SLAMF9Q96A28 289 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 TBX5Q99593 518 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 CITED2Q99967 270 aaPredicted RBP12.41□□□□□ -0.42
SKA3-204ENST00000462482 CADM1Q9BY67 442 aaKnown RBP12.41□□□□□ -0.42
SKA3-204ENST00000462482 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.41□□□□□ -0.42
SKA3-204ENST00000462482 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 SESN1Q9Y6P5 492 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 CMYA5Q8N3K9 4069 aa12.41□□□□□ -0.42
SKA3-204ENST00000462482 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 METTL15A6NJ78 407 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 OCM2P0CE71 109 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 OCMP0CE72 109 aaPredicted RBP12.4□□□□□ -0.42
SKA3-204ENST00000462482 CD33P20138 364 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 ATP1B3P54709 279 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 CCBE1Q6UXH8 406 aaPredicted RBP12.4□□□□□ -0.42
SKA3-204ENST00000462482 Q6ZSR3 168 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 SLC25A26Q70HW3 274 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 FAM220AQ7Z4H9 259 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 IL4I1Q96RQ9 567 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 MTCH1Q9NZJ7 389 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 WARS2Q9UGM6 360 aaKnown RBP12.4□□□□□ -0.42
SKA3-204ENST00000462482 POMPQ9Y244 141 aa12.4□□□□□ -0.42
SKA3-204ENST00000462482 IGHV2-26A0A0B4J1V2 119 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 FUOMA2VDF0 154 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 G3V2T6 193 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 H3BSH0 61 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 M0R129 80 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 HAND1O96004 215 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms