RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 Q6ZS46 218 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 TCEANCQ8N8B7 351 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 OR11H6Q8NGC7 330 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 MALSU1Q96EH3 234 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 NRBF2Q96F24 287 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 OR5M11Q96RB7 305 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 MNTQ99583 582 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
COL7A1-204ENST00000462475 CADM1Q9BY67 442 aaKnown RBP12.97□□□□□ -0.33
COL7A1-204ENST00000462475 PRRG3Q9BZD7 231 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 CLN6Q9NWW5 311 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
COL7A1-204ENST00000462475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL7A1-204ENST00000462475 IGKV1-27A0A075B6S5 117 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 TMEM82A0PJX8 343 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 INMTO95050 263 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 RPP14O95059 124 aaKnown RBP12.96□□□□□ -0.33
COL7A1-204ENST00000462475 RBP4P02753 201 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 EFNB1P98172 346 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 DYNC1I2Q13409 638 aaKnown RBP12.96□□□□□ -0.33
COL7A1-204ENST00000462475 EDDM3AQ14507 147 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 SLX4IPQ5VYV7 408 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 NXNL2Q5VZ03 156 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 GDPD3Q7L5L3 318 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 REC114Q7Z4M0 266 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 NDUFA11Q86Y39 141 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 OR4S1Q8NGB4 309 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 R3HDM4Q96D70 268 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 TBX5Q99593 518 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 PLEKHA1Q9HB21 404 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
COL7A1-204ENST00000462475 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 CHRM2P08172 466 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ACTR3P61158 418 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ACTA2P62736 377 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ACTG2P63267 376 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ACTC1P68032 377 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ACTA1P68133 377 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 C12orf73Q69YU5 71 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 OR8H2Q8N162 312 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 TPRX1Q8N7U7 411 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 MRAPQ8TCY5 172 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 UTP4Q969X6 686 aaKnown RBP12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ZNF714Q96N38 554 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 IL4I1Q96RQ9 567 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 PRSS22Q9GZN4 317 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 H2AFY2Q9P0M6 372 aaPredicted RBP12.95□□□□□ -0.34
COL7A1-204ENST00000462475 IL36RNQ9UBH0 155 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 SLC7A11Q9UPY5 501 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 POMPQ9Y244 141 aa12.95□□□□□ -0.34
COL7A1-204ENST00000462475 ZAR1LA6NP61 321 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 F2RL2O00254 374 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 GYG2O15488 501 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 APOL3O95236 402 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 DYNLT3P51808 116 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 BLCAPP62952 87 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 EMX1Q04741 257 aaPredicted RBP12.94□□□□□ -0.34
COL7A1-204ENST00000462475 DNAL1Q4LDG9 190 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 SLC25A26Q70HW3 274 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 YIPF7Q8N8F6 280 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 OR4F17Q8NGA8 305 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 OR4F4Q96R69 305 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 KRT84Q9NSB2 600 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 NECAP2Q9NVZ3 263 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 AURKAIP1Q9NWT8 199 aaPredicted RBP12.94□□□□□ -0.34
COL7A1-204ENST00000462475 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
COL7A1-204ENST00000462475 HILPDAQ9Y5L2 63 aa12.94□□□□□ -0.34
COL7A1-204ENST00000462475 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 SYT7O43581 403 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 PEX14O75381 377 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 IGHA1P01876 353 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 KRT8P05787 483 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 VDAC2P45880 294 aaPredicted RBP12.93□□□□□ -0.34
COL7A1-204ENST00000462475 OR12D2P58182 307 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 MEF2CQ06413 473 aaPredicted RBP12.93□□□□□ -0.34
COL7A1-204ENST00000462475 SLC34A1Q06495 639 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
COL7A1-204ENST00000462475 GID4Q8IVV7 300 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 ZNF676Q8N7Q3 588 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 OR52N4Q8NGI2 321 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 SGCDQ92629 289 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
COL7A1-204ENST00000462475 SNX22Q96L94 193 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 CHST6Q9GZX3 395 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
COL7A1-204ENST00000462475 A0A1W2PQL4 384 aaPredicted RBP12.92□□□□□ -0.34
COL7A1-204ENST00000462475 hADV38S2A0JD32 116 aa12.92□□□□□ -0.34
COL7A1-204ENST00000462475 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
COL7A1-204ENST00000462475 HAND1O96004 215 aa12.92□□□□□ -0.34
COL7A1-204ENST00000462475 DUSP1P28562 367 aa12.92□□□□□ -0.34
COL7A1-204ENST00000462475 FUT6P51993 359 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms