RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 OR14J1Q9UGF5 321 aa17.12■□□□□ 0.33
VARS-218ENST00000459667 PTGES3LE9PB15 166 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 PRDX2P32119 198 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 CAPZA1P52907 286 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 RBMS3Q6XE24 437 aaKnown RBP17.11■□□□□ 0.33
VARS-218ENST00000459667 C9orf139Q6ZV77 190 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 ZNF561Q8N587 486 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 SIGLECL1Q8N7X8 197 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 SPATA3Q8NHX4 192 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 C8orf46Q8TAG6 207 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 DMRTB1Q96MA1 342 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 Q9H521 79 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 ZCCHC4Q9H5U6 513 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 KPTNQ9Y664 436 aa17.11■□□□□ 0.33
VARS-218ENST00000459667 F8VVB4 439 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 F8VWA3 439 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 CYB5AP00167 134 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 KNG1P01042 644 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 MT-ND2P03891 347 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 CDK1P06493 297 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 C21orf33P30042 268 aaPredicted RBP17.1■□□□□ 0.33
VARS-218ENST00000459667 WNT4P56705 351 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 PDCD1Q15116 288 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 TUSC1Q2TAM9 212 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 BRD3OSQ6XYD6 125 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 SERPINA12Q8IW75 414 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 MKXQ8IYA7 352 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 CMTM4Q8IZR5 234 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 RPS4Y2Q8TD47 263 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 GPR148Q8TDV2 347 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 RGP1Q92546 391 aaPredicted RBP17.1■□□□□ 0.33
VARS-218ENST00000459667 SMIM19Q96E16 107 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 CNBD2Q96M20 576 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 DNHD1Q96M86 4753 aa17.1■□□□□ 0.33
VARS-218ENST00000459667 A0A1W2PQ09 198 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 TRIM77I1YAP6 450 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 OGG1O15527 345 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 CD2P06729 351 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 RNLSQ5VYX0 342 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 VMO1Q7Z5L0 202 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 Q8IYB0 196 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 PARP16Q8N5Y8 322 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 KIR3DL3Q8N743 410 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 OR5D14Q8NGL3 314 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 ZFAND2BQ8WV99 257 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 EMG1Q92979 244 aaKnown RBP17.09■□□□□ 0.33
VARS-218ENST00000459667 RFT1Q96AA3 541 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 ZNF48Q96MX3 618 aaPredicted RBP17.09■□□□□ 0.33
VARS-218ENST00000459667 SPACA5Q96QH8 159 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 ZNF184Q99676 751 aaPredicted RBP17.09■□□□□ 0.33
VARS-218ENST00000459667 MND1Q9BWT6 205 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 ESM1Q9NQ30 184 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 BLOC1S6Q9UL45 172 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 ZNF281Q9Y2X9 895 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 PCDHGB5Q9Y5G0 923 aa17.09■□□□□ 0.33
VARS-218ENST00000459667 SIRT4Q9Y6E7 314 aaPredicted RBP17.09■□□□□ 0.33
VARS-218ENST00000459667 SPRY1O43609 319 aaPredicted RBP17.08■□□□□ 0.32
VARS-218ENST00000459667 SULT1B1O43704 296 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 LALBAP00709 142 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 SOX2P48431 317 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 BPIFB3P59826 476 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 RUSC1-AS1Q66K80 236 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 NANOGP1Q8N7R0 232 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 ZDHHC22Q8N966 263 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 LHX4Q969G2 390 aa17.08■□□□□ 0.32
VARS-218ENST00000459667 SOX21Q9Y651 276 aaPredicted RBP17.08■□□□□ 0.32
VARS-218ENST00000459667 TRBV23-1A0A0A0MS06 115 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 CENPVL3A0A0U1RRI6 287 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 ALX3O95076 343 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 HCKP08631 526 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 BCL3P20749 454 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 PDZK1IP1Q13113 114 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 DMKNQ6E0U4 476 aaPredicted RBP17.07■□□□□ 0.32
VARS-218ENST00000459667 FAM185AQ8N0U4 392 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.07■□□□□ 0.32
VARS-218ENST00000459667 ZNF485Q8NCK3 441 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 OR5D18Q8NGL1 313 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 CPNE2Q96FN4 548 aaPredicted RBP17.07■□□□□ 0.32
VARS-218ENST00000459667 CDCA4Q9BXL8 241 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 SIRT7Q9NRC8 400 aa17.07■□□□□ 0.32
VARS-218ENST00000459667 RBFOX1Q9NWB1 397 aaKnown RBP17.07■□□□□ 0.32
VARS-218ENST00000459667 ANGPTL7O43827 346 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 NPBWR2P48146 333 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 SLC35A2P78381 396 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 COL10A1Q03692 680 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 YIF1BQ5BJH7 314 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 RBM48Q5RL73 367 aaKnown RBP17.06■□□□□ 0.32
VARS-218ENST00000459667 FIP1L1Q6UN15 594 aaKnown RBP17.06■□□□□ 0.32
VARS-218ENST00000459667 RNF144BQ7Z419 303 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 FAM58AQ8N1B3 248 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 ASCC1Q8N9N2 400 aaKnown RBP17.06■□□□□ 0.32
VARS-218ENST00000459667 GHSRQ92847 366 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 FAM234AQ9H0X4 552 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 C19orf12Q9NSK7 152 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 IL36RNQ9UBH0 155 aa17.06■□□□□ 0.32
VARS-218ENST00000459667 IGHV1-69DA0A0B4J2H0 117 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 MDFIC2A0A1B0GVS7 189 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 MAGEB3O15480 346 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 RGS10O43665 173 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 IGHV1-69P01742 117 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms