RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OR51F2Q8NH61 342 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 OR52I2Q8NH67 350 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 KLF14Q8TD94 323 aaPredicted RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 OR5P3Q8WZ94 311 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 MARS2Q96GW9 593 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 C1orf147Q96MC9 270 aaPredicted RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 NKX3-1Q99801 234 aaPredicted RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 SPOCK3Q9BQ16 436 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 ADAT1Q9BUB4 502 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 SELENOIQ9C0D9 397 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 C11orf54Q9H0W9 315 aaPredicted RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 LPAR5Q9H1C0 372 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 DPAGT1Q9H3H5 408 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 POFUT1Q9H488 388 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 IFT46Q9NQC8 304 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS50-207ENST00000458530 TMEM100Q9NV29 134 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAIMQ9NVQ4 179 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 MTFP1Q9UDX5 166 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 PURGQ9UJV8 347 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 ANKRD20A5PA0PJZ0 165 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 C19orf84I3L1E1 186 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 J3QT63 122 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 RAB27BO00194 218 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 PLA2G10O15496 165 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 ORC5O43913 435 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 PLATP00750 562 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 MELTFP08582 738 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 HIST1H1DP16402 221 aaKnown RBP7.64□□□□□ -1.19
VPS50-207ENST00000458530 TBPP20226 339 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 CA6P23280 308 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 CALCRP30988 508 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 CCKARP32238 428 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 GLRXP35754 106 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 HAAOP46952 286 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 GPM6AP51674 278 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 TAS2R19P59542 299 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 ADORA2A-AS1P86434 159 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 SORDQ00796 357 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 IL24Q13007 206 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 PSG7Q13046 419 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 PLA2G7Q13093 441 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 KLF9Q13886 244 aaPredicted RBP7.64□□□□□ -1.19
VPS50-207ENST00000458530 CDSNQ15517 529 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 PCGF3Q3KNV8 242 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 ZNF260Q3ZCT1 412 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 ACTBL2Q562R1 376 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
VPS50-207ENST00000458530 ELP2Q6IA86 826 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 CCBE1Q6UXH8 406 aaPredicted RBP7.64□□□□□ -1.19
VPS50-207ENST00000458530 SLC25A26Q70HW3 274 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 GDPD3Q7L5L3 318 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 NRARPQ7Z6K4 114 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 OSR2Q8N2R0 312 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 FAM89BQ8N5H3 189 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 OR13G1Q8NGZ3 307 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 GPX8Q8TED1 209 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 HPSE2Q8WWQ2 592 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 AQP3Q92482 292 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 RNASE6Q93091 150 aaKnown RBP7.64□□□□□ -1.19
VPS50-207ENST00000458530 Q96M66 194 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 NEDD4LQ96PU5 975 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 GAL3ST1Q99999 423 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 CXXC4Q9H2H0 198 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 BANF2Q9H503 90 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 MYEF2Q9P2K5 600 aaKnown RBP7.64□□□□□ -1.19
VPS50-207ENST00000458530 NDRG3Q9UGV2 375 aa7.64□□□□□ -1.19
VPS50-207ENST00000458530 FLNAP21333 2647 aaKnown RBP7.63□□□□□ -1.19
VPS50-207ENST00000458530 STAB1Q9NY15 2570 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 hCG_2014768A0A024R1R8 64 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 IGKV1-27A0A075B6S5 117 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 PLSCR5A0PG75 271 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 TMEM235A6NFC5 223 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 SPRY1O43609 319 aaPredicted RBP7.63□□□□□ -1.19
VPS50-207ENST00000458530 PFDN1O60925 122 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 AKAIN1P0CW23 69 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 ZNF250P15622 560 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 CD40P25942 277 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 BLVRBP30043 206 aaPredicted RBP7.63□□□□□ -1.19
VPS50-207ENST00000458530 RBM11P57052 281 aaKnown RBP7.63□□□□□ -1.19
VPS50-207ENST00000458530 KLF3P57682 345 aaPredicted RBP7.63□□□□□ -1.19
VPS50-207ENST00000458530 ARFRP1Q13795 201 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 MEF2DQ14814 521 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 ZMYND11Q15326 602 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 MPV17LQ2QL34 196 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 CDNFQ49AH0 187 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 NHLRC3Q5JS37 347 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 OLFML2AQ68BL7 652 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 ALKBH2Q6NS38 261 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 TRAPPC6BQ86SZ2 158 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 WFDC8Q8IUA0 241 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 TMEM229BQ8NBD8 167 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 TMEM104Q8NE00 496 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 DUSP18Q8NEJ0 188 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 NUP37Q8NFH4 326 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 CA5BP1Q8WTZ4 195 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 CREB3L1Q96BA8 519 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 RADILQ96JH8 1075 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 ESRP2Q9H6T0 727 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms