RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 HSD17B13Q7Z5P4 300 aaPredicted RBP14.39□□□□□ -0.11
CCDC43-202ENST00000457422 CALHM1Q8IU99 346 aa14.39□□□□□ -0.11
CCDC43-202ENST00000457422 EIF4E3Q8N5X7 224 aaKnown RBP14.39□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF611Q8N823 705 aa14.39□□□□□ -0.11
CCDC43-202ENST00000457422 OR56B2PQ8NGI1 322 aa14.39□□□□□ -0.11
CCDC43-202ENST00000457422 ARPC5LQ9BPX5 153 aa14.39□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF471Q9BX82 626 aaPredicted RBP14.39□□□□□ -0.11
CCDC43-202ENST00000457422 SESN1Q9Y6P5 492 aa14.39□□□□□ -0.11
CCDC43-202ENST00000457422 C5orf49A4QMS7 147 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 A8MXK9 166 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 H0YIZ8 118 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 IFNA2P01563 188 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 CD79AP11912 226 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 RRADP55042 308 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 SOX8P57073 446 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 TGIF1Q15583 401 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 PRSS54Q6PEW0 395 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 BRICD5Q6PL45 260 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 MCEMP1Q8IX19 187 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 C2orf50Q96LR7 162 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 C1orf123Q9NWV4 160 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 CRIM1Q9NZV1 1036 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 A0A1B0GW55 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A10PA6NDY2 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A18PA6NE21 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A16PA6NEW6 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A20PA6NIJ5 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A8PA6NJQ4 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A7PA6NKC0 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A22PA8MWA6 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A12PA8MX19 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A5PA8MXJ8 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A23PA8MXZ1 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 CST4P01036 141 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 KNG1P01042 644 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FGF2P09038 288 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A15PP0C7V4 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A13PP0C7W8 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A14PP0C7W9 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 FAM90A24PP0C7X0 464 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4L2P0CJ85 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4L3P0CJ86 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4L4P0CJ87 422 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4L5P0CJ88 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4L6P0CJ89 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4L7P0CJ90 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 CD82P27701 267 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 OPRM1P35372 400 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 MALLQ13021 153 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DAZAP2Q15038 168 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-202ENST00000457422 GLRX5Q86SX6 157 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 SAXO1Q8IYX7 474 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 POC1AQ8NBT0 407 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 STOML3Q8TAV4 291 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DCUN1D4Q92564 292 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 POM121L2Q96KW2 1035 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF75AQ96N20 296 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 C1QTNF6Q9BXI9 259 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DEFB127Q9H1M4 99 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 OPA3Q9H6K4 179 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 NARFLQ9H6Q4 476 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 DUX4Q9UBX2 424 aa14.38□□□□□ -0.11
CCDC43-202ENST00000457422 CRYM-AS1A6NIL9 109 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 F8VVB4 439 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 F8VWA3 439 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 KCNAB3O43448 404 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 M6PRP20645 277 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 RAB1AP62820 205 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 PRDX4Q13162 271 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 TMEM211Q6ICI0 200 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 SLC25A26Q70HW3 274 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 DPPA2Q7Z7J5 298 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 PIP4P1Q86T03 277 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 SGPP2Q8IWX5 399 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 OR10C1Q96KK4 312 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 PAPOLGQ9BWT3 736 aaKnown RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 LIME1Q9H400 295 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 METTL8Q9H825 291 aaKnown RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 F5H0A9 414 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 FUT3P21217 361 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 RBMXP38159 391 aaKnown RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 PDCD1Q15116 288 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 ELP2Q6IA86 826 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 MRPL21Q7Z2W9 205 aaKnown RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 BATF2Q8N1L9 274 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 RELL2Q8NC24 303 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 HPSE2Q8WWQ2 592 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 WDYHV1Q96HA8 205 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 FGF23Q9GZV9 251 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-202ENST00000457422 DNTTIP1Q9H147 329 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF286AQ9HBT8 521 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 C12orf4Q9NQ89 552 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 PRSS50Q9UI38 385 aa14.37□□□□□ -0.11
CCDC43-202ENST00000457422 PRSS44E7EML9 344 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 PET100P0DJ07 73 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 ARG2P78540 354 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 CEACAM21Q3KPI0 293 aa14.36□□□□□ -0.11
CCDC43-202ENST00000457422 PAN3Q58A45 887 aaKnown RBP14.36□□□□□ -0.11
CCDC43-202ENST00000457422 ZNF766Q5HY98 468 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms