RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 MMP9P14780 707 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 SOX2P48431 317 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 VMO1Q7Z5L0 202 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 PDZD9Q8IXQ8 264 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 ASCC1Q8N9N2 400 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 GPR148Q8TDV2 347 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 TFAP2CQ92754 450 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 HES4Q9HCC6 221 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 CNOT2Q9NZN8 540 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 CLEC2DQ9UHP7 191 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 CUBNO60494 3623 aa14.91□□□□□ -0.02
PDLIM2-215ENST00000456545 TRBV23-1A0A0A0MS06 115 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 SPRY1O43609 319 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 XPNPEP2O43895 674 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 ERVK11-1P61568 191 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 PDZK1IP1Q13113 114 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 RUSC1-AS1Q66K80 236 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 C9orf139Q6ZV77 190 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 AHSA2Q719I0 299 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 KIR3DL3Q8N743 410 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 OR52N1Q8NH53 320 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 C8orf46Q8TAG6 207 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 TBC1D15Q8TC07 691 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 FAM216AQ8WUB2 273 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 GCDHQ92947 438 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 SPACA5Q96QH8 159 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 SIRT7Q9NRC8 400 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 SOX21Q9Y651 276 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 ATRQ13535 2644 aa14.9□□□□□ -0.02
PDLIM2-215ENST00000456545 IGHV1-69DA0A0B4J2H0 117 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 MYL12BO14950 172 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 SULT1B1O43704 296 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 IGHV1-69P01742 117 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 MT-ND2P03891 347 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 PIPP12273 146 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 RAB3AP20336 220 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 BCL3P20749 454 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 EEF1B2P24534 225 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 RPL31P62899 125 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 COL10A1Q03692 680 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 CDK5R1Q15078 307 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 SATL1Q86VE3 508 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 FAM58AQ8N1B3 248 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 PARP16Q8N5Y8 322 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 ZDHHC22Q8N966 263 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 ZSCAN4Q8NAM6 433 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 CPNE2Q96FN4 548 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 ZNF48Q96MX3 618 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 DUX5Q96PT3 197 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 GPER1Q99527 375 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 PLCXD1Q9NUJ7 323 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 SCN3BQ9NY72 215 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 PSORS1C1Q9UIG5 152 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 PCDHGB5Q9Y5G0 923 aa14.89□□□□□ -0.03
PDLIM2-215ENST00000456545 hCG_1809904A0A1W2PP81 198 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 A0A1W2PPE2 198 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 A0A1W2PR64 198 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 A0A1W2PRV1 198 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 F8VVB4 439 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 F8VWA3 439 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 H0YJX3 145 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 OGG1O15527 345 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 ANGPTL7O43827 346 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 TK1P04183 234 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 TMEM225BP0DP42 221 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 CALCBP10092 127 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 PRKACAP17612 351 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 AQP4P55087 323 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 SNU13P55769 128 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 UBA52P62987 128 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 GUCA2AQ02747 115 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 DEFB112Q30KQ8 113 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 XAF1Q6GPH4 301 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 C1orf122Q6ZSJ8 110 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 GDPD3Q7L5L3 318 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 OR4M1Q8NGD0 313 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 OR5D18Q8NGL1 313 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 OR5D13Q8NGL4 314 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 NRG4Q8WWG1 115 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 SLC25A28Q96A46 364 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 FAM234AQ9H0X4 552 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 ZMAT3Q9HA38 289 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 ESM1Q9NQ30 184 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 RBFOX1Q9NWB1 397 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 ERGIC3Q9Y282 383 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 ZNF281Q9Y2X9 895 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 FAM96BQ9Y3D0 163 aa14.88□□□□□ -0.03
PDLIM2-215ENST00000456545 DNAJC9-AS1A6NH13 148 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 PTGES3LE9PB15 166 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 M0R1W7 72 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 ALX3O95076 343 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 HAND1O96004 215 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 PRTN3P24158 256 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 NPBWR2P48146 333 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 EDDM3BP56851 147 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 TAS2R43P59537 309 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 PPP3R1P63098 170 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 KISS1Q15726 138 aa14.87□□□□□ -0.03
PDLIM2-215ENST00000456545 C12orf54Q6X4T0 127 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms