RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 PIGYQ3MUY2 71 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 SGPP2Q8IWX5 399 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 MDS2Q8NDY4 140 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 IL17BQ9UHF5 180 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 MEMO1Q9Y316 297 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 GPR179Q6PRD1 2367 aa13.02□□□□□ -0.32
LDLR-202ENST00000455727 MPTX1A8MV57 137 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 PDCD6O75340 191 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 TNFSF15O95150 251 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 ACTL6AO96019 429 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 RBMXP38159 391 aaKnown RBP13.02□□□□□ -0.33
LDLR-202ENST00000455727 RRADP55042 308 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 RBM11P57052 281 aaKnown RBP13.02□□□□□ -0.33
LDLR-202ENST00000455727 TUSC1Q2TAM9 212 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 DHRS13Q6UX07 377 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 SPERTQ8NA61 448 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 APH1AQ96BI3 265 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 PRRG4Q9BZD6 226 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 SHARPINQ9H0F6 387 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 PRR13Q9NZ81 148 aa13.02□□□□□ -0.33
LDLR-202ENST00000455727 TNRC6AQ8NDV7 1962 aaKnown RBP13.02□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A10PA6NDY2 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A18PA6NE21 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A16PA6NEW6 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A20PA6NIJ5 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A8PA6NJQ4 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A7PA6NKC0 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 ZNF850A8MQ14 1090 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A22PA8MWA6 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A12PA8MX19 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A5PA8MXJ8 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A23PA8MXZ1 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A15PP0C7V4 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A13PP0C7W8 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A14PP0C7W9 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM90A24PP0C7X0 464 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 ZNF806P0C7X5 589 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 ARR3P36575 388 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 MALLQ13021 153 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 HES3Q5TGS1 186 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 TMEM211Q6ICI0 200 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 SAXO1Q8IYX7 474 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 SLC30A7Q8NEW0 376 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 RRNAD1Q96FB5 475 aaKnown RBP13.01□□□□□ -0.33
LDLR-202ENST00000455727 AQP10Q96PS8 301 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 PQLC2LA1A4F0 135 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 PRSS44E7EML9 344 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
LDLR-202ENST00000455727 FUT3P21217 361 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 OPRM1P35372 400 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 MEOX1P50221 254 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 FAM74A1Q5RGS3 127 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 CALHM1Q8IU99 346 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 ZNF611Q8N823 705 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 APOBEC3DQ96AK3 386 aaPredicted RBP13.01□□□□□ -0.33
LDLR-202ENST00000455727 LIME1Q9H400 295 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 GPR160Q9UJ42 338 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 NCOR1O75376 2440 aa13.01□□□□□ -0.33
LDLR-202ENST00000455727 DNAJC13O75165 2243 aa13□□□□□ -0.33
LDLR-202ENST00000455727 ZNF407Q9C0G0 2248 aa13□□□□□ -0.33
LDLR-202ENST00000455727 A0A096LPE4 126 aa13□□□□□ -0.33
LDLR-202ENST00000455727 A0A1W2PPZ6 126 aa13□□□□□ -0.33
LDLR-202ENST00000455727 TPD52L2O43399 206 aaKnown RBP13□□□□□ -0.33
LDLR-202ENST00000455727 SS18L1O75177 396 aaPredicted RBP13□□□□□ -0.33
LDLR-202ENST00000455727 CST4P01036 141 aa13□□□□□ -0.33
LDLR-202ENST00000455727 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
LDLR-202ENST00000455727 ZFP62Q8NB50 900 aaPredicted RBP13□□□□□ -0.33
LDLR-202ENST00000455727 GALNT11Q8NCW6 608 aa13□□□□□ -0.33
LDLR-202ENST00000455727 TMEM9BQ9NQ34 198 aa13□□□□□ -0.33
LDLR-202ENST00000455727 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
LDLR-202ENST00000455727 C5orf49A4QMS7 147 aa13□□□□□ -0.33
LDLR-202ENST00000455727 HLA-HP01893 362 aa13□□□□□ -0.33
LDLR-202ENST00000455727 PPIAP62937 165 aaKnown RBP13□□□□□ -0.33
LDLR-202ENST00000455727 SLC10A1Q14973 349 aa13□□□□□ -0.33
LDLR-202ENST00000455727 ELP2Q6IA86 826 aa13□□□□□ -0.33
LDLR-202ENST00000455727 UNQ6126/PRO20091Q6UXV3 157 aa13□□□□□ -0.33
LDLR-202ENST00000455727 SREK1IP1Q8N9Q2 155 aaPredicted RBP13□□□□□ -0.33
LDLR-202ENST00000455727 OR56B2PQ8NGI1 322 aa13□□□□□ -0.33
LDLR-202ENST00000455727 ZNF286AQ9HBT8 521 aa13□□□□□ -0.33
LDLR-202ENST00000455727 C12orf4Q9NQ89 552 aa13□□□□□ -0.33
LDLR-202ENST00000455727 CYTL1Q9NRR1 136 aa13□□□□□ -0.33
LDLR-202ENST00000455727 OR5AC2Q9NZP5 309 aa13□□□□□ -0.33
LDLR-202ENST00000455727 GLS2Q9UI32 602 aa13□□□□□ -0.33
LDLR-202ENST00000455727 BDP1A6H8Y1 2624 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 KCNAB3O43448 404 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 HOXB5P09067 269 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 ZNF728P0DKX0 622 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 FOXG1P55316 489 aaPredicted RBP12.99□□□□□ -0.33
LDLR-202ENST00000455727 UCP3P55916 312 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 RAB32Q13637 225 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 SLC25A26Q70HW3 274 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 DPPA2Q7Z7J5 298 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 TMEM200AQ86VY9 491 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
LDLR-202ENST00000455727 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms