RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MAGT1Q9H0U3 335 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 LOC102723996A0A087X1L8 192 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 DUS4LO95620 317 aaKnown RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 APLNRP35414 380 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 HGFACQ04756 655 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 ANKRD55Q3KP44 614 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM88Q6PEY1 159 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OSR2Q8N2R0 312 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 MITD1Q8WV92 249 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 SULT4A1Q9BR01 284 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR5AC2Q9NZP5 309 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 NPTNQ9Y639 398 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 SPAARA0A1B0GVQ0 90 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF732B4DXR9 585 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 HSD17B6O14756 317 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 IFNA2P01563 188 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 MEOX1P50221 254 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 UBA52P62987 128 aaKnown RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 CYCSP99999 105 aaKnown RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM123Q8N131 208 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 STPG2Q8N412 459 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 ZSCAN4Q8NAM6 433 aaPredicted RBP10.42□□□□□ -0.74
SMPD4-213ENST00000454468 HSD17B11Q8NBQ5 300 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR11L1Q8NGX0 322 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 OR10C1Q96KK4 312 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 KCNS2Q9ULS6 477 aa10.42□□□□□ -0.74
SMPD4-213ENST00000454468 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 F8W036 122 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 LDLRAD4O15165 306 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 GRPP07492 148 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 TPT1P13693 172 aaKnown RBP10.41□□□□□ -0.74
SMPD4-213ENST00000454468 BLOC1S1P78537 153 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 CLINT1Q14677 625 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 PPA1Q15181 289 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 STX12Q86Y82 276 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 ZDHHC22Q8N966 263 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 RTN4IP1Q8WWV3 396 aaPredicted RBP10.41□□□□□ -0.74
SMPD4-213ENST00000454468 FAM173AQ9BQD7 235 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 FZR1Q9UM11 496 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 PRELID3BQ9Y3B1 194 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 NPIPB13A6NJU9 1138 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 NPIPB4C9JG80 1138 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 TRAPPC2LH3BP13 241 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 K7EPK0 472 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 RBMXL2O75526 392 aaKnown RBP10.41□□□□□ -0.74
SMPD4-213ENST00000454468 CNR1P21554 472 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 SLC10A1Q14973 349 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 ARRDC1Q8N5I2 433 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 FAM71E2Q8N5Q1 922 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 BCO1Q9HAY6 547 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF286AQ9HBT8 521 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 MED6O75586 246 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 HPP00738 406 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 CD74P04233 296 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 CRHP06850 196 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 H3F3AP84243 136 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 ZNF239Q16600 458 aaKnown RBP10.41□□□□□ -0.74
SMPD4-213ENST00000454468 LTC4SQ16873 150 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 NHLRC3Q5JS37 347 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 FBXW12Q6X9E4 464 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM251Q8N6I4 163 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 DEFB124Q8NES8 71 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 OR51H1Q8NH63 302 aa10.41□□□□□ -0.74
SMPD4-213ENST00000454468 ADAT1Q9BUB4 502 aaKnown RBP10.41□□□□□ -0.74
SMPD4-213ENST00000454468 HEATR1Q9H583 2144 aaKnown RBP10.4□□□□□ -0.74
SMPD4-213ENST00000454468 OR6C6A6NF89 314 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 LYZL6O75951 148 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 SFT2D2O95562 160 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
SMPD4-213ENST00000454468 CD46P15529 392 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 SELEP16581 610 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 CA6P23280 308 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 UBE2NP61088 152 aaKnown RBP10.4□□□□□ -0.74
SMPD4-213ENST00000454468 ACTBL2Q562R1 376 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 LURAP1LQ8IV03 231 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 TMEM217Q8N7C4 229 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 OR1S1Q8NH92 325 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 NABP1Q96AH0 204 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 PLPPR2Q96GM1 343 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 TTTY12Q9BZ98 90 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 WNT5BQ9H1J7 359 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 IL36RNQ9UBH0 155 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 PCDHB10Q9UN67 800 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 OTOGLQ3ZCN5 2332 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 LOC390937A0A1W2PQ73 354 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 MSGN1A6NI15 193 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 LRRC3CA6NJW4 275 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 SERPINE3A8MV23 424 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 LRP3O75074 770 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 OR2F2O95006 317 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 HOXC12P31275 282 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 CLN3Q13286 438 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 OR2F1Q13607 317 aa10.4□□□□□ -0.74
SMPD4-213ENST00000454468 HOGA1Q86XE5 327 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms