RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 DUSP13Q9UII6 198 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 ATP23Q9Y6H3 246 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 DOPEY1Q5JWR5 2465 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 FAM208BQ5VWN6 2430 aa5.09□□□□□ -1.59
SDC4P-201ENST00000453285 AKAP6Q13023 2319 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 MYO18BQ8IUG5 2567 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 LINC00854A0A1B0GVQ3 168 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 ANKRD20A5PA0PJZ0 165 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A10PA6NDY2 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A18PA6NE21 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A16PA6NEW6 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 TMEM235A6NFC5 223 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 TUBAL3A6NHL2 446 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A20PA6NIJ5 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A8PA6NJQ4 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A7PA6NKC0 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A22PA8MWA6 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A12PA8MX19 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A5PA8MXJ8 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A23PA8MXZ1 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 TRAPPC2LH3BP13 241 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 C19orf84I3L1E1 186 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CDIPTO14735 213 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 GEMIN2O14893 280 aaKnown RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CA11O75493 328 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 RBBP9O75884 186 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CSTBP04080 98 aaKnown RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 GRPP07492 148 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CD3EP07766 207 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 ADH4P08319 380 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 GSTP1P09211 210 aaKnown RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 OR4A8P0C604 315 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A15PP0C7V4 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A13PP0C7W8 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A14PP0C7W9 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 FAM90A24PP0C7X0 464 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 PGA5P0DJD9 388 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 HIST1H1DP16402 221 aaKnown RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 GNB3P16520 340 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 IGFBP2P18065 325 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CPT2P23786 658 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CHATP28329 748 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 BLVRBP30043 206 aaPredicted RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 BTCP35070 178 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 GDNFP39905 211 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 PMELP40967 661 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 KIR2DL3P43628 341 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 RBM11P57052 281 aaKnown RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 DEFA1P59665 94 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 DEFA3P59666 94 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 MPPED2Q15777 294 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 PNLIPRP3Q17RR3 467 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 MST1LQ2TV78 715 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 PIGYQ3MUY2 71 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 BEX5Q5H9J7 111 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 PRAMEF6Q5VXH4 476 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 TRIQKQ629K1 86 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 ZNF826PQ6ZT77 177 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 Q6ZTK2 550 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 NRARPQ7Z6K4 114 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 BATF2Q8N1L9 274 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 MINDY2Q8NBR6 621 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 POC1AQ8NBT0 407 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 CHST4Q8NCG5 386 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 C19orf18Q8NEA5 215 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 OR2Z1Q8NG97 314 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 RAB3CQ96E17 227 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 ARHGAP5-AS1Q96IT6 56 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 NEDD4LQ96PU5 975 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 NRIP2Q9BQI9 281 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 SCPEP1Q9HB40 452 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 RHOFQ9HBH0 211 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 HES4Q9HCC6 221 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 PCDHB16Q9NRJ7 776 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 RBFOX1Q9NWB1 397 aaKnown RBP5.08□□□□□ -1.6
SDC4P-201ENST00000453285 IL36RNQ9UBH0 155 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 POU2F3Q9UKI9 436 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 HSF4Q9ULV5 492 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 ANAPC10Q9UM13 185 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 ST3GAL6Q9Y274 331 aa5.08□□□□□ -1.6
SDC4P-201ENST00000453285 IGHV3-64DA0A0J9YX35 117 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 MEIS3P1A6NDR6 274 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 PRSS44E7EML9 344 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 LYRM1O43325 122 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 SPRY3O43610 288 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 PTTG1O95997 202 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 CYB5AP00167 134 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 IGHV1-46P01743 117 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 LPLP06858 475 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 RNF224P0DH78 156 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 NAT1P18440 290 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 GABRR1P24046 479 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 APOBEC3AP31941 199 aaPredicted RBP5.07□□□□□ -1.6
SDC4P-201ENST00000453285 CFHR2P36980 270 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 RBMXP38159 391 aaKnown RBP5.07□□□□□ -1.6
SDC4P-201ENST00000453285 ZNF81P51508 661 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 SELENOVP59797 346 aa5.07□□□□□ -1.6
SDC4P-201ENST00000453285 HOXA4Q00056 320 aaPredicted RBP5.07□□□□□ -1.6
SDC4P-201ENST00000453285 SSBP1Q04837 148 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms