RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MYPOPQ86VE0 399 aaPredicted RBP10.14□□□□□ -0.79
VTA1-203ENST00000452973 SLC30A7Q8NEW0 376 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 PRSS33Q8NF86 280 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 COQ8AQ8NI60 647 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 HPSE2Q8WWQ2 592 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 WBP1Q96G27 269 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 HIST1H2AAQ96QV6 131 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 RTBDNQ9BSG5 229 aaPredicted RBP10.14□□□□□ -0.79
VTA1-203ENST00000452973 FGF23Q9GZV9 251 aaPredicted RBP10.14□□□□□ -0.79
VTA1-203ENST00000452973 RNF122Q9H9V4 155 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 LUZP4Q9P127 313 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 RFPL4AA6NLU0 287 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 RFPL4AL1F8VTS6 287 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 TEX46H3BTG2 121 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 IL2RAP01589 272 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 ZDHHC23Q8IYP9 409 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 ZNF488Q96MN9 340 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 METTL8Q9H825 291 aaKnown RBP10.14□□□□□ -0.79
VTA1-203ENST00000452973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.14□□□□□ -0.79
VTA1-203ENST00000452973 ANXA10Q9UJ72 324 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 SHANK1Q9Y566 2161 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 CD300LBA8K4G0 201 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 HMSDA8MTL9 139 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 OR5H8P0DN80 308 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 TAS2R31P59538 309 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 DHODHQ02127 395 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 SLC22A25Q6T423 547 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 NEK7Q8TDX7 302 aa10.14□□□□□ -0.79
VTA1-203ENST00000452973 CHMP1AQ9HD42 196 aaPredicted RBP10.14□□□□□ -0.79
VTA1-203ENST00000452973 FCGR3AP08637 254 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 HOXB5P09067 269 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 CA6P23280 308 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 FPR2P25090 351 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 RBM11P57052 281 aaKnown RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 HAGHLQ6PII5 290 aaPredicted RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 BCL2L2Q92843 193 aaPredicted RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 GSKIPQ9P0R6 139 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 C14orf166Q9Y224 244 aaKnown RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 OSGIN2Q9Y236 505 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 PIEZO2Q9H5I5 2752 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 TRAV17A0A0B4J275 112 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 UBE2NP61088 152 aaKnown RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 SUPT4H1P63272 117 aaKnown RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 ANKRD55Q3KP44 614 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 GSG1LQ6UXU4 331 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 FOXRED2Q8IWF2 684 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 PXT1Q8NFP0 134 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 MARS2Q96GW9 593 aaKnown RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 GMPPAQ96IJ6 420 aaPredicted RBP10.13□□□□□ -0.79
VTA1-203ENST00000452973 LIME1Q9H400 295 aa10.13□□□□□ -0.79
VTA1-203ENST00000452973 TEX13DA0A0J9YY54 714 aaPredicted RBP10.12□□□□□ -0.79
VTA1-203ENST00000452973 PRR33A8MZF0 331 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 SYNGR1O43759 233 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 ERVS71-1P61550 626 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 C11orf87Q6NUJ2 197 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 FAHD2BQ6P2I3 314 aaPredicted RBP10.12□□□□□ -0.79
VTA1-203ENST00000452973 ZNF585AQ6P3V2 769 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 LHFPL1Q86WI0 220 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 FAHD2AQ96GK7 314 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 SCGB3A2Q96PL1 93 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 ATPIF1Q9UII2 106 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 DMXL2Q8TDJ6 3036 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 PQLC2LA1A4F0 135 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 ANKRD30BLA7E2S9 258 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 LEUTXA8MZ59 168 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 LRP3O75074 770 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 PDCD6O75340 191 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 IGHV1-2P23083 117 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 FGL1Q08830 312 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 CEACAM21Q3KPI0 293 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 RTL6Q6ICC9 239 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 ASCL4Q6XD76 172 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 THAP6Q8TBB0 222 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 NANOS1Q8WY41 292 aaKnown RBP10.12□□□□□ -0.79
VTA1-203ENST00000452973 WDR13Q9H1Z4 485 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 MTCH1Q9NZJ7 389 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 MBD2Q9UBB5 411 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 AGFG2O95081 481 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 SFT2D2O95562 160 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 COX5BP10606 129 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 STK11Q15831 433 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 LPCAT3Q6P1A2 487 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 VWA1Q6PCB0 445 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 C17orf78Q8N4C9 275 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 OR5T2Q8NGG2 359 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 GSX2Q9BZM3 304 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 HSF4Q9ULV5 492 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 KCNMB2Q9Y691 235 aa10.12□□□□□ -0.79
VTA1-203ENST00000452973 DCHS1Q96JQ0 3298 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 ESPL1Q14674 2120 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 TRAPPC2LH3BP13 241 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 CD8AP01732 235 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 FUT3P21217 361 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 IKZF1Q13422 519 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 SP6Q3SY56 376 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 FAM214BQ7L5A3 538 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 TMEM185AQ8NFB2 350 aa10.11□□□□□ -0.79
VTA1-203ENST00000452973 TECTBQ96PL2 329 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms