RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TCTEX1D2Q8WW35 142 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 ADGRG7Q96K78 797 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 SF3B5Q9BWJ5 86 aaKnown RBP10.52□□□□□ -0.72
COL27A1-202ENST00000451716 OR10A2Q9H208 303 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 PRR13Q9NZ81 148 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 V9GYS6 101 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 SPTBN2O15020 2390 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 LCATP04180 440 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 ZBTB25P24278 435 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 SLC25A42Q86VD7 318 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 KCNE4Q8WWG9 221 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 ADAT1Q9BUB4 502 aaKnown RBP10.52□□□□□ -0.73
COL27A1-202ENST00000451716 CHST5Q9GZS9 411 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 TMEM38BQ9NVV0 291 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 SLC2A8Q9NY64 477 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF581Q9P0T4 197 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 PCNX2A6NKB5 2137 aa10.52□□□□□ -0.73
COL27A1-202ENST00000451716 FAM230AA0A1W2PPH8 454 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 FAM166BA8MTA8 275 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 MFNGO00587 321 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 SYNGR3O43761 229 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 CD59P13987 128 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 THBS4P35443 961 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 HTR5AP47898 357 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 RPS27AP62979 156 aaKnown RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 MPPED2Q15777 294 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 DHRS13Q6UX07 377 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 SPNS3Q6ZMD2 512 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 OR56B1Q8NGI3 324 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 TSNAXQ99598 290 aaKnown RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 URM1Q9BTM9 101 aaKnown RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 SPRY4Q9C004 299 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 OR5H14A6NHG9 310 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 CDX4O14627 284 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 KCNAB3O43448 404 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 SPRY1O43609 319 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 SOX15O60248 233 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 SCGNO76038 276 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 NEURL1O76050 574 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 CRYGSP22914 178 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 GABRR1P24046 479 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 PSG4Q00888 419 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 NHLH2Q02577 135 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 BEX5Q5H9J7 111 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 GALNTL5Q7Z4T8 443 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 LYG2Q86SG7 212 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 PUSL1Q8N0Z8 303 aaKnown RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 CCDC54Q8NEL0 328 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 OR56B2PQ8NGI1 322 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 OR5M8Q8NGP6 311 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 REEP6Q96HR9 211 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 S100A13Q99584 98 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 FOXB1Q99853 325 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 IL17BQ9UHF5 180 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 HMSDA8MTL9 139 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 EFSO43281 561 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 GSTP1P09211 210 aaKnown RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 GSK3AP49840 483 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 GFRA1P56159 465 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 GMFBP60983 142 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 NKAPLQ5M9Q1 402 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 C6orf201Q7Z4U5 140 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 OR1F12Q8NHA8 337 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 TMPRSS5Q9H3S3 457 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 METTL1Q9UBP6 276 aaKnown RBP10.51□□□□□ -0.73
COL27A1-202ENST00000451716 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
COL27A1-202ENST00000451716 HSPA12AO43301 675 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 RP2O75695 350 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 SPDEFO95238 335 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 HPNP05981 417 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 CRHP06850 196 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 TMEM225BP0DP42 221 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 CNR1P21554 472 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 MTCP1P56278 107 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 RAB35Q15286 201 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 SLC16A14Q7RTX9 510 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF546Q86UE3 836 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 SKA3Q8IX90 412 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 PP6455Q8WZ26 134 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 HAS2Q92819 552 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 CLUHP3Q96NS8 147 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 HDHD3Q9BSH5 251 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-202ENST00000451716 PRDM13Q9H4Q3 707 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 RPH3ALQ9UNE2 315 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 SPENQ96T58 3664 aaKnown RBP10.5□□□□□ -0.73
COL27A1-202ENST00000451716 EEF1E1-BLOC1S5C9J1V9 151 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 ZNF883P0CG24 379 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 AMY2BP19961 511 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 C4BPBP20851 252 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 ATP1B3P54709 279 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 ABHD17BQ5VST6 288 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 VHLLQ6RSH7 139 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 MEX3BQ6ZN04 569 aaKnown RBP10.5□□□□□ -0.73
COL27A1-202ENST00000451716 FAM219AQ8IW50 185 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 BATF2Q8N1L9 274 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 TERB2Q8NHR7 220 aa10.5□□□□□ -0.73
COL27A1-202ENST00000451716 THAP6Q8TBB0 222 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms