RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 OR51A2Q8NGJ7 313 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 C8orf46Q8TAG6 207 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 CPNE2Q96FN4 548 aaPredicted RBP11.9□□□□□ -0.5
COL3A1-203ENST00000450867 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 NUDT16L1Q9BRJ7 211 aaKnown RBP11.9□□□□□ -0.5
COL3A1-203ENST00000450867 TAS2R4Q9NYW5 299 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 IGKV1-12A0A0C4DH73 117 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 ZNF879B4DU55 563 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 NDUFB3O43676 98 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 KDM4BO94953 1096 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 CYB5AP00167 134 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 IGKV1D-12P01611 117 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 LIPFP07098 398 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 SRD5A1P18405 259 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 MLLT11Q13015 90 aaPredicted RBP11.89□□□□□ -0.51
COL3A1-203ENST00000450867 ZNF146Q15072 292 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 MED22Q15528 200 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 DGUOKQ16854 277 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 TUSC1Q2TAM9 212 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 LRRC10Q5BKY1 277 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 UNQ9370/PRO34162Q6UXP9 181 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 ASCL4Q6XD76 172 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 IL17RELQ6ZVW7 336 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 ZNF561Q8N587 486 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 CD177Q8N6Q3 437 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 Q8NFD4 153 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 SLAMF9Q96A28 289 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 DERL3Q96Q80 235 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 SPACA5Q96QH8 159 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 OR14A2Q96R54 314 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 TMEM138Q9NPI0 162 aa11.89□□□□□ -0.51
COL3A1-203ENST00000450867 RPUSD1Q9UJJ7 312 aaKnown RBP11.89□□□□□ -0.51
COL3A1-203ENST00000450867 PNMA8CA0A1B0GUJ8 204 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 PIN1P1O15428 100 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 HCKP08631 526 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 OCMP0CE72 109 aaPredicted RBP11.88□□□□□ -0.51
COL3A1-203ENST00000450867 SELLP14151 372 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 MAPK3P27361 379 aaPredicted RBP11.88□□□□□ -0.51
COL3A1-203ENST00000450867 PRDX2P32119 198 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 NPBWR2P48146 333 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 POU3F4P49335 361 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 ELP2Q6IA86 826 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 BTN2A1Q7KYR7 527 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 CDH26Q8IXH8 852 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 PNLDC1Q8NA58 520 aaKnown RBP11.88□□□□□ -0.51
COL3A1-203ENST00000450867 UPRTQ96BW1 309 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 DCTN5Q9BTE1 182 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 HMG20AQ9NP66 347 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 ACOT13Q9NPJ3 140 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
COL3A1-203ENST00000450867 FOXJ3Q9UPW0 622 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 AUP1Q9Y679 476 aa11.88□□□□□ -0.51
COL3A1-203ENST00000450867 TRAV8-7A0A075B6U6 113 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 GABRPO00591 440 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 MAGEB3O15480 346 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 SPRY1O43609 319 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-203ENST00000450867 ZNF737O75373 536 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 PLATP00750 562 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 TFF1P04155 84 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 CPEP16870 476 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 BCL3P20749 454 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 EEF1B2P24534 225 aaKnown RBP11.87□□□□□ -0.51
COL3A1-203ENST00000450867 BDKRB2P30411 391 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 GABRA2P47869 451 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 PPP3R1P63098 170 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 ZNF367Q7RTV3 350 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 LYPD6Q86Y78 171 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 FAM58AQ8N1B3 248 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 KIR3DL3Q8N743 410 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 OR52N4Q8NGI2 321 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 ST8SIA4Q92187 359 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 UFD1Q92890 307 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 RFT1Q96AA3 541 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 ORAI1Q96D31 301 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 MGLLQ99685 303 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 CCDC90BQ9GZT6 254 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 RBFOX1Q9NWB1 397 aaKnown RBP11.87□□□□□ -0.51
COL3A1-203ENST00000450867 IL36GQ9NZH8 169 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 CKLFQ9UBR5 152 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 COL6A5A8TX70 2615 aa11.87□□□□□ -0.51
COL3A1-203ENST00000450867 TRBV23-1A0A0A0MS06 115 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 ANGPTL7O43827 346 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 SFTPBP07988 381 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 MMP9P14780 707 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 ADRA2CP18825 462 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 PSMA1P25786 263 aaKnown RBP11.86□□□□□ -0.51
COL3A1-203ENST00000450867 TGFBR2P37173 567 aa11.86□□□□□ -0.51
COL3A1-203ENST00000450867 MAP2K4P45985 399 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms