RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	ISG20L2	Q9H9L3	353 aa	Known RBP	12.97	□□□□□ -0.33
HDLBP-223	ENST00000449864	MTCH1	Q9NZJ7	389 aa		12.97	□□□□□ -0.33
HDLBP-223	ENST00000449864	POMT1	Q9Y6A1	747 aa		12.97	□□□□□ -0.33
HDLBP-223	ENST00000449864	OR4C45	A6NMZ5	311 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	PAH	P00439	452 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	TK1	P04183	234 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	FBP1	P09467	338 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	CCDC159	P0C7I6	412 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	GBX2	P52951	348 aa	Predicted RBP	12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	SMN1	Q16637	294 aa	Known RBP	12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	LPCAT4	Q643R3	524 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	LHFPL2	Q6ZUX7	228 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	EGFL6	Q8IUX8	553 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	OR51A4	Q8NGJ6	313 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	OR13C9	Q8NGT0	318 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	TSEN15	Q8WW01	171 aa	Known RBP	12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	CHIA	Q9BZP6	476 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	FAM234A	Q9H0X4	552 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	NEK6	Q9HC98	313 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	C8orf4	Q9NR00	106 aa		12.96	□□□□□ -0.33
HDLBP-223	ENST00000449864	IGKV1-9	A0A0C4DH69	117 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	hCG_1809904	A0A1W2PP81	198 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864		A0A1W2PPE2	198 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864		A0A1W2PR64	198 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864		A0A1W2PRV1	198 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	IRGM	A1A4Y4	181 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	BTBD17	A6NE02	478 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	FAM181B	A6NEQ2	426 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	TMEM212	A6NML5	194 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864		F8VVB4	439 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864		F8VWA3	439 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	ANGPTL7	O43827	346 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	WBP4	O75554	376 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	IGHV4-59	P01825	116 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	RPSA	P08865	295 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	PIP	P12273	146 aa	Predicted RBP	12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	PEX2	P28328	305 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	SAA4	P35542	130 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	COL10A1	Q03692	680 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	ZNF691	Q5VV52	312 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	LDLRAD3	Q86YD5	345 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	PACRGL	Q8N7B6	248 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	SETD9	Q8NE22	299 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	OR4M1	Q8NGD0	313 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	OR5AK2	Q8NH90	309 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	CNIH3	Q8TBE1	160 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	HAVCR2	Q8TDQ0	301 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	RFT1	Q96AA3	541 aa		12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	UNKL	Q9H9P5	680 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	MRPS18A	Q9NVS2	196 aa	Known RBP	12.95	□□□□□ -0.34
HDLBP-223	ENST00000449864	TRBV2	A0A0J9YWF9	115 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	MEIOC	A2RUB1	952 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	CLIC3	O95833	236 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	CHRM2	P08172	466 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	OMG	P23515	440 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	UBE2E1	P51965	193 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	EDDM3B	P56851	147 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	ACSM1	Q08AH1	577 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	TTC23	Q5W5X9	447 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	TMEM200B	Q69YZ2	307 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	GDPD3	Q7L5L3	318 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	PNKD	Q8N490	385 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	TAF15	Q92804	592 aa	Known RBP eCLIP	12.94	□□□□□ -0.34	3e-9	■□□□□ 8.5
HDLBP-223	ENST00000449864	DPAGT1	Q9H3H5	408 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	ZCCHC4	Q9H5U6	513 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	FGF20	Q9NP95	211 aa	Predicted RBP	12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	RBFOX1	Q9NWB1	397 aa	Known RBP	12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	ZNRD1	Q9P1U0	126 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864	DHDH	Q9UQ10	334 aa		12.94	□□□□□ -0.34
HDLBP-223	ENST00000449864		E9PI62	339 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864		K7N7A8	449 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	SPRY1	O43609	319 aa	Predicted RBP	12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	ZFPL1	O95159	310 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	HAND1	O96004	215 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	HCK	P08631	526 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	LIMS3	P0CW19	117 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	LIMS4	P0CW20	117 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	PRKACA	P17612	351 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	MYL12A	P19105	171 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	BCL3	P20749	454 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	IER3	P46695	156 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	SNU13	P55769	128 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	RAG2	P55895	527 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	TMPRSS11A	Q6ZMR5	421 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	OR8H2	Q8N162	312 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	FAM58A	Q8N1B3	248 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	DHRSX	Q8N5I4	330 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	OR5D18	Q8NGL1	313 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	DYRK2	Q92630	601 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	TNFRSF14	Q92956	283 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	SPACA5	Q96QH8	159 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	PDCD1LG2	Q9BQ51	273 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	ZNF649	Q9BS31	505 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	GLS2	Q9UI32	602 aa		12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	SF3B6	Q9Y3B4	125 aa	Known RBP	12.93	□□□□□ -0.34
HDLBP-223	ENST00000449864	GPR137B	O60478	399 aa		12.92	□□□□□ -0.34
HDLBP-223	ENST00000449864	CALCB	P10092	127 aa		12.92	□□□□□ -0.34
HDLBP-223	ENST00000449864	CCL3L1	P16619	93 aa		12.92	□□□□□ -0.34
HDLBP-223	ENST00000449864	MDK	P21741	143 aa	Predicted RBP	12.92	□□□□□ -0.34
HDLBP-223	ENST00000449864	GABRR1	P24046	479 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms