RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TMEM185AQ8NFB2 350 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 FBLIM1Q8WUP2 373 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 RGP1Q92546 391 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 SLAMF9Q96A28 289 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 SLC25A28Q96A46 364 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 MRPL48Q96GC5 212 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 MYCBPQ99417 103 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 FAM234AQ9H0X4 552 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 METTL8Q9H825 291 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 SIRT7Q9NRC8 400 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 IGKV1-12A0A0C4DH73 117 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 TMEM82A0PJX8 343 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 IGKV1D-12P01611 117 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 GNAO1P09471 354 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 AZGP1P25311 298 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 DLX6P56179 175 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 MTCP1P56278 107 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 PDZK1IP1Q13113 114 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 CNN3Q15417 329 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 AWAT1Q58HT5 328 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 ASPHD2Q6ICH7 369 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 ZNF529Q6P280 563 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 ZNF676Q8N7Q3 588 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 CYGBQ8WWM9 190 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 TAF15Q92804 592 aaKnown RBP eCLIP11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 GGHQ92820 318 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 SPSB1Q96BD6 273 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 NKX1-2Q9UD57 310 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 CLEC2DQ9UHP7 191 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 DIMT1Q9UNQ2 313 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 HSPE1-MOB4S4R3N1 261 aa11.51□□□□□ -0.57
RTFDC1-204ENST00000449062 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 H0YAE9 185 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 SLC1A7O00341 560 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 OGG1O15527 345 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 INMTO95050 263 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 LALBAP00709 142 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 CHRM2P08172 466 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 RPSAP08865 295 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 IER3P46695 156 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 UBE2E1P51965 193 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 GBX2P52951 348 aaPredicted RBP11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 RPL31P62899 125 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 COL10A1Q03692 680 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 IL18R1Q13478 541 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 ZNF146Q15072 292 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 CCDC58Q4VC31 144 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 OR2G6Q5TZ20 316 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 C17orf107Q6ZR85 190 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 LDLRAD3Q86YD5 345 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 MKXQ8IYA7 352 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 OR13C3Q8NGS6 347 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 OR5AK2Q8NH90 309 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 HAVCR2Q8TDQ0 301 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 IL36RNQ9UBH0 155 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
RTFDC1-204ENST00000449062 TRBV2A0A0J9YWF9 115 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 A0A1W2PQ09 198 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 NPFFO15130 113 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 SPRY1O43609 319 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 ZNF20P17024 532 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 BCL3P20749 454 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 CAPGP40121 348 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 CAPZA1P52907 286 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 FOXL1Q12952 345 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 KLRD1Q13241 179 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 RPL22L1Q6P5R6 122 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 LHFPL2Q6ZUX7 228 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 FAM58AQ8N1B3 248 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 PNKDQ8N490 385 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 OR4M1Q8NGD0 313 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 OR5D14Q8NGL3 314 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 OR13C9Q8NGT0 318 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 TFAP2CQ92754 450 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 SNX22Q96L94 193 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 OPALINQ96PE5 141 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 SPACA5Q96QH8 159 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 DCLRE1BQ9H816 532 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 HMG20AQ9NP66 347 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 PLCXD1Q9NUJ7 323 aa11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 RBFOX1Q9NWB1 397 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-204ENST00000449062 FAM181BA6NEQ2 426 aa11.48□□□□□ -0.57
RTFDC1-204ENST00000449062 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
RTFDC1-204ENST00000449062 ANGPTL7O43827 346 aa11.48□□□□□ -0.57
RTFDC1-204ENST00000449062 KDM4BO94953 1096 aa11.48□□□□□ -0.57
RTFDC1-204ENST00000449062 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
RTFDC1-204ENST00000449062 CCDC159P0C7I6 412 aa11.48□□□□□ -0.57
RTFDC1-204ENST00000449062 ZP1P60852 638 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms