RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OR3A3P47888 321 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 GZMKP49863 264 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 SNU13P55769 128 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 RBM11P57052 281 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 TAF9Q16594 264 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 C3orf36Q3SXR2 165 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 NHLRC3Q5JS37 347 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 NKAPLQ5M9Q1 402 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 OR52W1Q6IF63 320 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 FAHD2BQ6P2I3 314 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 LINC00596Q86U02 117 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 FBXL14Q8N1E6 418 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 OR11H7Q8NGC8 314 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 OR1J1Q8NGS3 322 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 HPSE2Q8WWQ2 592 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 ASB13Q8WXK3 278 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 FBXW5Q969U6 566 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 FAHD2AQ96GK7 314 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 SEC22CQ9BRL7 303 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 RTL8AQ9BWD3 113 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 BCL2L14Q9BZR8 327 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 PKIBQ9C010 78 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 OPN3Q9H1Y3 402 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 POFUT1Q9H488 388 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 PAIP2BQ9ULR5 123 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 ST3GAL6Q9Y274 331 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 FAM215AQ9Y5M1 114 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 CACNA1BQ00975 2339 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 IQCF6A8MYZ5 107 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 PDCD6O75340 191 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 SNAPC5O75971 98 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 TOXO94900 526 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 IGLV1-44P01699 117 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 CHATP28329 748 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 OPRM1P35372 400 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 ECI1P42126 302 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 GPM6AP51674 278 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 TAS2R31P59538 309 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 FGF12P61328 243 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 TSPAN5P62079 268 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 CDK10Q15131 360 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 NKPD1Q17RQ9 610 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 MPV17LQ2QL34 196 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 CHRFAM7AQ494W8 412 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 C4orf46Q504U0 113 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 TIMM23BQ5SRD1 257 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 OR2T2Q6IF00 324 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 C6orf201Q7Z4U5 140 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 CALHM1Q8IU99 346 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 OR5AP2Q8NGF4 316 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF431Q8TF32 576 aaPredicted RBP9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 EXTL1Q92935 676 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 EMG1Q92979 244 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 CMSS1Q9BQ75 279 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 OR51B6Q9H340 312 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 PIGMQ9H3S5 423 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 LUZP4Q9P127 313 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 TUBD1Q9UJT1 453 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 POU2F3Q9UKI9 436 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 NPTNQ9Y639 398 aa9.06□□□□□ -0.96
VIPAS39-203ENST00000448935 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 A0A1W2PR80 420 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 MSTNO14793 375 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 GEMIN2O14893 280 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 PMP2P02689 132 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 CSN2P05814 226 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SFTPBP07988 381 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 CELA3BP08861 270 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 OR4E1P0C645 316 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 VSIG10L2P0DP72 767 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 FUT3P21217 361 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 TDGF1P3P51864 188 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 NKX2-5P52952 324 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 UBE2MP61081 183 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 RBPJQ06330 500 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 IL24Q13007 206 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 GRK1Q15835 563 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 MICBQ29980 383 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 BHLHE23Q8NDY6 225 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 OR13C8Q8NGS7 320 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 TERB2Q8NHR7 220 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SLC25A40Q8TBP6 338 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 MDFIQ99750 246 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 ST6GALNAC5Q9BVH7 336 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF436Q9C0F3 470 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 OR2J1Q9GZK6 312 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 SPACA1Q9HBV2 294 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF701Q9NV72 531 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 MGAT4CQ9UBM8 478 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 POLDIP2Q9Y2S7 368 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 EPG5Q9HCE0 2579 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 TPRP12270 2363 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 DCHS1Q96JQ0 3298 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 FAM172BPA6NC97 362 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 TMEM210A6NLX4 147 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 J3QT63 122 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 FABP7O15540 132 aa9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-203ENST00000448935 GSTT2P0CG29 244 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms