RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 A0A0B4J2A0 478 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 CST2P09228 141 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 MMP7P09237 267 aaPredicted RBP12.81□□□□□ -0.36
SF1-211ENST00000448404 PTGER4P35408 488 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 SCRN3Q0VDG4 424 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 RPUSD3Q6P087 351 aaKnown RBP12.81□□□□□ -0.36
SF1-211ENST00000448404 SLC25A26Q70HW3 274 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 OR10AD1Q8NGE0 317 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 DCUN1D4Q92564 292 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 OCSTAMPQ9BR26 566 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 SHPKQ9UHJ6 478 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 BOKQ9UMX3 212 aaPredicted RBP12.81□□□□□ -0.36
SF1-211ENST00000448404 RELNP78509 3460 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 ZNF292O60281 2723 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 DUS4LO95620 317 aaKnown RBP12.81□□□□□ -0.36
SF1-211ENST00000448404 MPPED2Q15777 294 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 TMEM164Q5U3C3 297 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 ZDHHC22Q8N966 263 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 OR56B2PQ8NGI1 322 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
SF1-211ENST00000448404 GTF3C1Q12789 2109 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 MED12LQ86YW9 2145 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 CD8AP01732 235 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 IGHEP01854 428 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 RPA2P15927 270 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 CPT2P23786 658 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 PHLDA2Q53GA4 152 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 PDZD9Q8IXQ8 264 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 WNT2BQ93097 391 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 CPNE4Q96A23 557 aaPredicted RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 RNF126Q9BV68 326 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 METTL8Q9H825 291 aaKnown RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 CHMP1AQ9HD42 196 aaPredicted RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 MLXQ9UH92 298 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 ST3GAL6Q9Y274 331 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 hCG_38984A0A1B0GV85 526 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 SPAARA0A1B0GVQ0 90 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 F5H0A9 414 aaPredicted RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 RBP2P50120 134 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 MEOX1P50221 254 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 S100A10P60903 97 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 DAZAP2Q15038 168 aaPredicted RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 TSC22D1Q15714 1073 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 TMEM128Q5BJH2 165 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 OR5AP2Q8NGF4 316 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 OR11L1Q8NGX0 322 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 FAM173AQ9BQD7 235 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 MED9Q9NWA0 146 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 OSGIN2Q9Y236 505 aa12.8□□□□□ -0.36
SF1-211ENST00000448404 KLF2Q9Y5W3 355 aaPredicted RBP12.8□□□□□ -0.36
SF1-211ENST00000448404 CADP27708 2225 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 DIDO1Q9BTC0 2240 aaKnown RBP12.79□□□□□ -0.36
SF1-211ENST00000448404 OR7C1O76099 320 aaPredicted RBP12.79□□□□□ -0.36
SF1-211ENST00000448404 SELEP16581 610 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 GPM6AP51674 278 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 PLA2G2CQ5R387 149 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 TMEM88Q6PEY1 159 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 GCNT2Q8N0V5 402 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 CDC6Q99741 560 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 OR2S2Q9NQN1 319 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 ESPL1Q14674 2120 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 H7C2Y5 167 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 GLAP06280 429 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 CRHP06850 196 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 RPS2P15880 293 aaKnown RBP12.79□□□□□ -0.36
SF1-211ENST00000448404 PPIAP62937 165 aaKnown RBP12.79□□□□□ -0.36
SF1-211ENST00000448404 RAB32Q13637 225 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 VAX1Q5SQQ9 334 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 ADAMTS17Q8TE56 1095 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 METTL9Q9H1A3 318 aa12.79□□□□□ -0.36
SF1-211ENST00000448404 ESRP2Q9H6T0 727 aaKnown RBP12.79□□□□□ -0.36
SF1-211ENST00000448404 PRSS44E7EML9 344 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 F8W036 122 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 SLC33A1O00400 549 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 NKX2-8O15522 239 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 HOXA1P49639 335 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 HSD17B13Q7Z5P4 300 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 MYPOPQ86VE0 399 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 INTS12Q96CB8 462 aaKnown RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 CMSS1Q9BQ75 279 aaKnown RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 DDA1Q9BW61 102 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 STARD10Q9Y365 291 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 DBX1A6NMT0 343 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 TERTO14746 1132 aaKnown RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 LHFPL1Q86WI0 220 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 OR5M9Q8NGP3 310 aa12.78□□□□□ -0.36
SF1-211ENST00000448404 ZNF552Q9H707 407 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 MYOZ1Q9NP98 299 aaPredicted RBP12.78□□□□□ -0.36
SF1-211ENST00000448404 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms