RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 BTG1P62324 171 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 BLMHQ13867 455 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 MICBQ29980 383 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 AVPI1Q5T686 147 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 TEX36Q5VZQ5 186 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM166AQ6J272 317 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SHISA2Q6UWI4 295 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 GLIPR1L1Q6UWM5 242 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 ACP7Q6ZNF0 438 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 NR2C2APQ86WQ0 139 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 CLVS1Q8IUQ0 354 aaPredicted RBP6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 Q8IYB0 196 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 C19orf18Q8NEA5 215 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 DEFB108BQ8NET1 73 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 OR4D6Q8NGJ1 314 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC25A28Q96A46 364 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SEH1LQ96EE3 360 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 CEP19Q96LK0 163 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 PIMREGQ9BSJ6 248 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 BPESC1Q9GZL8 116 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 METTL9Q9H1A3 318 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 RHOFQ9HBH0 211 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 HES4Q9HCC6 221 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SMURF1Q9HCE7 757 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 MRPS28Q9Y2Q9 187 aaKnown RBP6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 WIPI2Q9Y4P8 454 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 VPS13CQ709C8 3753 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 PRRC2AP48634 2157 aaKnown RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CCDC168Q8NDH2 2452 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 DYSFO75923 2080 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 IGHV3OR15-7A0A075B7D8 119 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 TRAV38-1A0A0B4J264 116 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 A0A0G2JK05 382 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 IFITM5A6NNB3 132 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 NOTOA8MTQ0 251 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC17A2O00624 439 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF780AO75290 641 aaPredicted RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 GYPAP02724 150 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CLEC2LP0C7M8 214 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CALCBP10092 127 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC25A16P16260 332 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CFPP27918 469 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 HTR2CP28335 458 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CD80P33681 288 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 MDH2P40926 338 aaKnown RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 BMXP51813 675 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 NCS1P62166 190 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 MXD1Q05195 221 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 GPR176Q14439 515 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 RSU1Q15404 277 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 KCNJ8Q15842 424 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 RAB11BQ15907 218 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF404Q494X3 552 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 TMEM155Q4W5P6 130 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 ATPAF1Q5TC12 328 aaPredicted RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 ELP2Q6IA86 826 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM90A1Q86YD7 464 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 LURAP1LQ8IV03 231 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM58AQ8N1B3 248 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 BATF2Q8N1L9 274 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 MUC20Q8N307 709 aaPredicted RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 WFDC11Q8NEX6 87 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 Q8NFD4 153 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 OR5T2Q8NGG2 359 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 OR6M1Q8NGM8 313 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 TBC1D15Q8TC07 691 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 C12orf43Q96C57 262 aaKnown RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 Q96MF0 132 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 S100A13Q99584 98 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 TMEM246Q9BRR3 403 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM192AQ9GZU8 254 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 MRPL18Q9H0U6 180 aaKnown RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 ELL3Q9HB65 397 aaPredicted RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 PLGRKTQ9HBL7 147 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 HMG20AQ9NP66 347 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 PCDHB16Q9NRJ7 776 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 RBFOX1Q9NWB1 397 aaKnown RBP6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 IL36GQ9NZH8 169 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 NLKQ9UBE8 527 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 DNAJB11Q9UBS4 358 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 GHRLQ9UBU3 117 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 STEAP1Q9UHE8 339 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CEPT1Q9Y6K0 416 aa6.31□□□□□ -1.4
AC004540.1-206ENST00000448056 CHD3Q12873 2000 aaKnown RBP6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 IGKV1D-17A0A075B6S4 117 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 IGHV4-61A0A0C4DH41 118 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 SMIM30A4D0T7 59 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 ISPDA4D126 451 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 RFPL4AA6NLU0 287 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 OR2AT4A6NND4 320 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 RFPL4AL1F8VTS6 287 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 AIPO00170 330 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 NDUFA2O43678 99 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 HTR3BO95264 441 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 KNG1P01042 644 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 IL1AP01583 271 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 CSTBP04080 98 aaKnown RBP6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 WNT2P09544 360 aa6.3□□□□□ -1.4
AC004540.1-206ENST00000448056 UBBP0CG47 229 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms