RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LCATP04180 440 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 CTSDP07339 412 aaPredicted RBP16.84■□□□□ 0.29
HMGA1-205ENST00000447654 PFN1P07737 140 aaKnown RBP16.84■□□□□ 0.29
HMGA1-205ENST00000447654 EMP2P54851 167 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 SLC37A1P57057 533 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 RPL23AP62750 156 aaKnown RBP16.84■□□□□ 0.29
HMGA1-205ENST00000447654 BTN3A2P78410 334 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 PSG6Q00889 435 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 SMAD4Q13485 552 aaKnown RBP16.84■□□□□ 0.29
HMGA1-205ENST00000447654 ZNF74Q16587 644 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 FAM90A2PQ658T7 463 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 SMRP1Q8NCR6 262 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 GNPNAT1Q96EK6 184 aaPredicted RBP16.84■□□□□ 0.29
HMGA1-205ENST00000447654 CD207Q9UJ71 328 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 R4GMQ9 66 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 A0A1B0GV50 99 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 DIRAS3O95661 229 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 PPBPP02775 128 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 GABRG2P18507 467 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 ZNF141Q15928 474 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 ZNF66Q6ZN08 573 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 GRINAQ7Z429 371 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 SLC22A18ASQ8N1D0 253 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 ZNF700Q9H0M5 742 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 FBRSQ9HAH7 460 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGA1-205ENST00000447654 TRBV11-1A0A0K0K1C0 115 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 LOC107986453A0A1B0GWG9 222 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 CRYM-AS1A6NIL9 109 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF732B4DXR9 585 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 SRSF10O75494 262 aaKnown RBP16.83■□□□□ 0.28
HMGA1-205ENST00000447654 NXPH2O95156 264 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 CELA2BP08218 269 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF888P0CJ79 500 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-205ENST00000447654 PNMTP11086 282 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 SELEP16581 610 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 ELLP55199 621 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-205ENST00000447654 LCN10Q6JVE6 187 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF100Q8IYN0 542 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 C11orf42Q8N5U0 333 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 P2RX4Q99571 388 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 CISD1Q9NZ45 108 aaKnown RBP16.83■□□□□ 0.28
HMGA1-205ENST00000447654 HEBP2Q9Y5Z4 205 aa16.83■□□□□ 0.28
HMGA1-205ENST00000447654 C4orf47A7E2U8 309 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 C2CD4DB7Z1M9 353 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 CIDEAO60543 219 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 HNRNPA2B1P22626 353 aaKnown RBP16.82■□□□□ 0.28
HMGA1-205ENST00000447654 SFTPDP35247 375 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 RAB7AP51149 207 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 FOXK1P85037 733 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF542PQ5EBM4 170 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 C1orf140Q5VVS0 124 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 LRTM2Q8N967 370 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 MRPL24Q96A35 216 aaKnown RBP16.82■□□□□ 0.28
HMGA1-205ENST00000447654 C8orf44Q96CB5 159 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 PITX3O75364 302 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 SCGB1D2O95969 90 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 ASAH2BP0C7U1 165 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 DRD1P21728 446 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 ATP6V0CP27449 155 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 CENPVQ7Z7K6 275 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF440Q8IYI8 595 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 TMEFF1Q8IYR6 380 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 OR2I1PQ8NGU4 316 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 TSLPQ969D9 159 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 TSPAN32Q96QS1 320 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 LPAR5Q9H1C0 372 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 GPR35Q9HC97 309 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 LRP4O75096 1905 aa16.82■□□□□ 0.28
HMGA1-205ENST00000447654 TDRD6O60522 2096 aaKnown RBP16.81■□□□□ 0.28
HMGA1-205ENST00000447654 IGKV1D-42A0A075B6H8 117 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 ST8SIA3O43173 380 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 CEACAM1P13688 526 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 ZFP36L1Q07352 338 aaKnown RBP16.81■□□□□ 0.28
HMGA1-205ENST00000447654 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 Q6ZSR6 202 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 ZAR1Q86SH2 424 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 OR13H1Q8NG92 308 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 OR2D3Q8NGH3 330 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 OR10G6Q8NH81 332 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 PTPMT1Q8WUK0 201 aaPredicted RBP16.81■□□□□ 0.28
HMGA1-205ENST00000447654 OR2A5Q96R48 311 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 SERINC2Q96SA4 455 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 LMF2Q9BU23 707 aaKnown RBP16.81■□□□□ 0.28
HMGA1-205ENST00000447654 B9D1Q9UPM9 204 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 MRPS2Q9Y399 296 aaKnown RBP16.81■□□□□ 0.28
HMGA1-205ENST00000447654 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 MRPS21P82921 87 aaKnown RBP16.81■□□□□ 0.28
HMGA1-205ENST00000447654 P2RY6Q15077 328 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 TEX43Q6ZNM6 134 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 Q6ZS52 159 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 SULF2Q8IWU5 870 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 OR4N5Q8IXE1 308 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 FBXL14Q8N1E6 418 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 GPR119Q8TDV5 335 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 KCNE4Q8WWG9 221 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 PPP1R14AQ96A00 147 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 TPSD1Q9BZJ3 242 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 Q9N2K0 584 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms