RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 C1orf21Q9H246 121 aa2.4□□□□□ -2.03
PMS1-215ENST00000447232 CACYBPQ9HB71 228 aaKnown RBP2.4□□□□□ -2.03
PMS1-215ENST00000447232 PNRC2Q9NPJ4 139 aaKnown RBP2.4□□□□□ -2.03
PMS1-215ENST00000447232 LZTFL1Q9NQ48 299 aa2.4□□□□□ -2.03
PMS1-215ENST00000447232 ZIM2Q9NZV7 527 aa2.4□□□□□ -2.03
PMS1-215ENST00000447232 FBXL17Q9UF56 701 aa2.4□□□□□ -2.03
PMS1-215ENST00000447232 PYCARDQ9ULZ3 195 aa2.4□□□□□ -2.03
PMS1-215ENST00000447232 FIS1Q9Y3D6 152 aa2.4□□□□□ -2.03
PMS1-215ENST00000447232 A0A1W2PPI3 338 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 MEX3AA1L020 520 aaKnown RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 RFPL4AA6NLU0 287 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 ANKRD30BLA7E2S9 258 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 ZNF785A8K8V0 405 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RFPL4AL1F8VTS6 287 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 BUB1B-PAK6H3BSN5 160 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 H7C1C5 153 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SLC1A7O00341 560 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 MPPED1O15442 326 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CHEK2O96017 543 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 HSPB1P04792 205 aaKnown RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 P0DMU3 169 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FAM231AP0DMU4 169 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FAM231CP0DMU5 169 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 OR5H8P0DN80 308 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CTRB1P17538 263 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FUT1P19526 365 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CD34P28906 385 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 DDOSTP39656 456 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CEACAM3P40198 252 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SERPINB9P50453 376 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 MFAP2P55001 183 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RGS8P57771 180 aaPredicted RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 LCN6P62502 163 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 TIGD6Q17RP2 521 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 HLA-DRB5Q30154 266 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SPANXN4Q5MJ08 99 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CTRB2Q6GPI1 263 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 ZYG11AQ6WRX3 759 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SPATA12Q7Z6I5 190 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 C5orf24Q7Z6I8 188 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RTN4RL2Q86UN3 420 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 NKAIN4Q8IVV8 208 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 ABHD12Q8N2K0 398 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 Q8N6K4 173 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 LRRC75AQ8NAA5 344 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 OR2K2Q8NGT1 345 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 OR56B4Q8NH76 319 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 C11orf45Q8TAV5 145 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SCARB1Q8WTV0 552 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SPSB4Q96A44 273 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CREB3L1Q96BA8 519 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FLYWCH2Q96CP2 140 aaKnown RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 OR8B4Q96RC9 309 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 NRIP2Q9BQI9 281 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FUT8Q9BYC5 575 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FGF23Q9GZV9 251 aaPredicted RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 GRPEL1Q9HAV7 217 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 PLEKHA1Q9HB21 404 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 SLC2A8Q9NY64 477 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 ETAA1Q9NY74 926 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RPS6KA6Q9UK32 745 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 EMCNQ9ULC0 261 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 FAT3Q8TDW7 4589 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 IGHV4-4A0A075B6R2 117 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 LOC102724200A0A096LPH7 203 aaPredicted RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 A6NIZ1 184 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 TMEM210A6NLX4 147 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 C11orf94C9JXX5 98 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 K7N7A8 449 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 PSMD9O00233 223 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 OR7A10O76100 309 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 KRT75O95678 551 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CSN3P07498 182 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 CPA3P15088 417 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 OTX1P32242 354 aaPredicted RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 GNALP38405 381 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 GLIPR1P48060 266 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RAP1BP61224 184 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RAP1AP62834 184 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 EMX2Q04743 252 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 RAB40BQ12829 278 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 HNF4GQ14541 408 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 DEFB135Q30KP9 77 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 ALG10Q5BKT4 473 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 AGBL2Q5U5Z8 902 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 PVRIGQ6DKI7 326 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 MPP4Q96JB8 637 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 PANX1Q96RD7 426 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 PRSS27Q9BQR3 290 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 DGCR6LQ9BY27 220 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 OPA3Q9H6K4 179 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 PLSCR3Q9NRY6 295 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 THUMPD1Q9NXG2 353 aaKnown RBP2.39□□□□□ -2.03
PMS1-215ENST00000447232 ZNF180Q9UJW8 692 aa2.39□□□□□ -2.03
PMS1-215ENST00000447232 IGLV2-18A0A075B6J9 118 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZNF850A8MQ14 1090 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 M0R135 149 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 DLGAP1O14490 977 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 AHCYL1O43865 530 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms