RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 COMMD4Q9H0A8 199 aa15.43■□□□□ 0.06
HDAC4-203ENST00000445704 SIRT4Q9Y6E7 314 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-203ENST00000445704 HSPE1-MOB4S4R3N1 261 aa15.43■□□□□ 0.06
HDAC4-203ENST00000445704 A0A1W2PQ09 198 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 IRGMA1A4Y4 181 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 SLC1A7O00341 560 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 SPRY1O43609 319 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-203ENST00000445704 LALBAP00709 142 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 BPIFB3P59826 476 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 SLC34A1Q06495 639 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 KLRD1Q13241 179 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 CDK5R1Q15078 307 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 SLC9A3R2Q15599 337 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 LHFPL2Q6ZUX7 228 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 CMTM4Q8IZR5 234 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 FAM185AQ8N0U4 392 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 PRDM13Q9H4Q3 707 aa15.42■□□□□ 0.06
HDAC4-203ENST00000445704 RBFOX1Q9NWB1 397 aaKnown RBP15.42■□□□□ 0.06
HDAC4-203ENST00000445704 EXOSC1Q9Y3B2 195 aaKnown RBP15.42■□□□□ 0.06
HDAC4-203ENST00000445704 TRBV23-1A0A0A0MS06 115 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 IGKV1-12A0A0C4DH73 117 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 RNASEK-C17orf49H0YIS7 233 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 ANGPTL7O43827 346 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 XPNPEP2O43895 674 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 IGKV1D-12P01611 117 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 MT-ND2P03891 347 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 CALCBP10092 127 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 BCL3P20749 454 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 COL10A1Q03692 680 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 ASPHD2Q6ICH7 369 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 TMPRSS11AQ6ZMR5 421 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 PARP16Q8N5Y8 322 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 OR5D18Q8NGL1 313 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 HAVCR2Q8TDQ0 301 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 TSEN15Q8WW01 171 aaKnown RBP15.41■□□□□ 0.06
HDAC4-203ENST00000445704 TFAP2CQ92754 450 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 TNFRSF14Q92956 283 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 EMG1Q92979 244 aaKnown RBP15.41■□□□□ 0.06
HDAC4-203ENST00000445704 TMEM80Q96HE8 168 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 ZCCHC4Q9H5U6 513 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 DHDHQ9UQ10 334 aa15.41■□□□□ 0.06
HDAC4-203ENST00000445704 TMEM89A2RUT3 159 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 M0R1W7 72 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 HOXA3O43365 443 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-203ENST00000445704 ZNF737O75373 536 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 TK1P04183 234 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 PIPP12273 146 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-203ENST00000445704 MYL12AP19105 171 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 SOX2P48431 317 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 ST3GAL4Q11206 333 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 PDZK1IP1Q13113 114 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 CCDC58Q4VC31 144 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 RPL22L1Q6P5R6 122 aaKnown RBP15.4■□□□□ 0.06
HDAC4-203ENST00000445704 METAP1DQ6UB28 335 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-203ENST00000445704 MKXQ8IYA7 352 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 ZNF485Q8NCK3 441 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 OR4M1Q8NGD0 313 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 VCXQ9H320 206 aa15.4■□□□□ 0.06
HDAC4-203ENST00000445704 A0A0U1RQK1 487 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 A0A1W2PRD5 423 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 A0A1W2PRF3 423 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 A0A1W2PRM7 423 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 CLDN34H7C241 214 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 OGG1O15527 345 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 SULT1B1O43704 296 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 RNASE1P07998 156 aaKnown RBP15.39■□□□□ 0.05
HDAC4-203ENST00000445704 OCM2P0CE71 109 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 OCMP0CE72 109 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-203ENST00000445704 RPL31P62899 125 aaKnown RBP15.39■□□□□ 0.05
HDAC4-203ENST00000445704 DOC2BQ14184 412 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 TMEM200BQ69YZ2 307 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 Q6YL49 198 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 C1orf122Q6ZSJ8 110 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 SERPINA12Q8IW75 414 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 PNKDQ8N490 385 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 ASCC1Q8N9N2 400 aaKnown RBP15.39■□□□□ 0.05
HDAC4-203ENST00000445704 OR52N1Q8NH53 320 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 GCDHQ92947 438 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-203ENST00000445704 ZDHHC16Q969W1 377 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 FAM234AQ9H0X4 552 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 ZMAT3Q9HA38 289 aaKnown RBP15.39■□□□□ 0.05
HDAC4-203ENST00000445704 BABAM2Q9NXR7 383 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 PSORS1C1Q9UIG5 152 aa15.39■□□□□ 0.05
HDAC4-203ENST00000445704 TMEM82A0PJX8 343 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 EFCAB10A6NFE3 127 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 K7N7A8 449 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 ALX3O95076 343 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 HAND1O96004 215 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 CHRM2P08172 466 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 MELTFP08582 738 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 RPSAP08865 295 aaKnown RBP15.38■□□□□ 0.05
HDAC4-203ENST00000445704 DUSP1P28562 367 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 AQP4P55087 323 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 SNU13P55769 128 aaKnown RBP15.38■□□□□ 0.05
HDAC4-203ENST00000445704 ZNF273Q14593 569 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 HCP5Q6MZN7 132 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 AHSA2Q719I0 299 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 Q8IYB0 196 aa15.38■□□□□ 0.05
HDAC4-203ENST00000445704 FAM58AQ8N1B3 248 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms