RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ABCB10Q9NRK6 738 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 KRT84Q9NSB2 600 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEC13-213ENST00000445064 SLC7A11Q9UPY5 501 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 TBL2Q9Y4P3 447 aaKnown RBP12.46□□□□□ -0.41
SEC13-213ENST00000445064 PRKDCP78527 4128 aaKnown RBP12.45□□□□□ -0.42
SEC13-213ENST00000445064 IGKV1-27A0A075B6S5 117 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 DHRS7CA6NNS2 312 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 ODF3BA8MYP8 253 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 PLXNB1O43157 2135 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 ZNF737O75373 536 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 FBXO24O75426 580 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 JUNBP17275 347 aaPredicted RBP12.45□□□□□ -0.42
SEC13-213ENST00000445064 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
SEC13-213ENST00000445064 CNN3Q15417 329 aaKnown RBP12.45□□□□□ -0.42
SEC13-213ENST00000445064 DNAL1Q4LDG9 190 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 ZNF626Q68DY1 528 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 C12orf73Q69YU5 71 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 Q6ZS46 218 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 EGFL6Q8IUX8 553 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 Q8N2B8 174 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 RPS4Y2Q8TD47 263 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 CEP19Q96LK0 163 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 CDCA4Q9BXL8 241 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 MMP28Q9H239 520 aa12.45□□□□□ -0.42
SEC13-213ENST00000445064 TMEM82A0PJX8 343 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 ZAR1LA6NP61 321 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 KRT8P05787 483 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 CCL1P22362 96 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 BLCAPP62952 87 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 EDDM3AQ14507 147 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 Q6ZPA2 131 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 CATSPERDQ86XM0 798 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
SEC13-213ENST00000445064 R3HDM4Q96D70 268 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 SNX22Q96L94 193 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 ZNF714Q96N38 554 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 CITED2Q99967 270 aaPredicted RBP12.44□□□□□ -0.42
SEC13-213ENST00000445064 PRSS22Q9GZN4 317 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 PLEKHA1Q9HB21 404 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 PITPNC1Q9UKF7 332 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 HILPDAQ9Y5L2 63 aa12.44□□□□□ -0.42
SEC13-213ENST00000445064 G3V2T6 193 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 SYT7O43581 403 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 PEX14O75381 377 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 DNAJC8O75937 253 aaPredicted RBP12.43□□□□□ -0.42
SEC13-213ENST00000445064 APOL3O95236 402 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 RBP4P02753 201 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 CALCBP10092 127 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 FUT6P51993 359 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 OR12D2P58182 307 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 ACTA2P62736 377 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 ACTG2P63267 376 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 ACTC1P68032 377 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 ACTA1P68133 377 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 ARSJQ5FYB0 599 aaPredicted RBP12.43□□□□□ -0.42
SEC13-213ENST00000445064 SLC25A26Q70HW3 274 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 TCF23Q7RTU1 214 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 GID4Q8IVV7 300 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 OR8H2Q8N162 312 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 OR52N4Q8NGI2 321 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 ADI1Q9BV57 179 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 IL36RNQ9UBH0 155 aa12.43□□□□□ -0.42
SEC13-213ENST00000445064 A0A1W2PQL4 384 aaPredicted RBP12.42□□□□□ -0.42
SEC13-213ENST00000445064 METTL15A6NJ78 407 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 IGHA1P01876 353 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 OR2T7P0C7T2 308 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 DUSP1P28562 367 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 POLR2IP36954 125 aaKnown RBP12.42□□□□□ -0.42
SEC13-213ENST00000445064 MEF2CQ06413 473 aaPredicted RBP12.42□□□□□ -0.42
SEC13-213ENST00000445064 SLC34A1Q06495 639 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 KDM4DQ6B0I6 523 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 NDUFA11Q86Y39 141 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 RDH10Q8IZV5 341 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 ZNF676Q8N7Q3 588 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
SEC13-213ENST00000445064 EMG1Q92979 244 aaKnown RBP12.42□□□□□ -0.42
SEC13-213ENST00000445064 BORCS8Q96FH0 119 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 WNT10AQ9GZT5 417 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 CHST6Q9GZX3 395 aa12.42□□□□□ -0.42
SEC13-213ENST00000445064 WARS2Q9UGM6 360 aaKnown RBP12.42□□□□□ -0.42
SEC13-213ENST00000445064 hADV38S2A0JD32 116 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 ADARB2-AS1A8MUL3 147 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 XPNPEP2O43895 674 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 MMP23AO75900 390 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 HAND1O96004 215 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 SERPINA3P01011 423 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 GABRR1P24046 479 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 PEX2P28328 305 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 NPBWR2P48146 333 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 DYNLT3P51808 116 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 GRK1Q15835 563 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 ATP6AP1Q15904 470 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 REC114Q7Z4M0 266 aa12.41□□□□□ -0.42
SEC13-213ENST00000445064 AMIGO2Q86SJ2 522 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms