RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 OR11H4Q8NGC9 324 aa13.46□□□□□ -0.25
SNX13-204ENST00000444712 MARCH1Q8TCQ1 289 aa13.46□□□□□ -0.25
SNX13-204ENST00000444712 ANXA10Q9UJ72 324 aa13.46□□□□□ -0.25
SNX13-204ENST00000444712 GPR132Q9UNW8 380 aa13.46□□□□□ -0.25
SNX13-204ENST00000444712 AMDHD2Q9Y303 409 aa13.46□□□□□ -0.25
SNX13-204ENST00000444712 C9orf170A2RU37 121 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 PDGFAP04085 211 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 GMFBP60983 142 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 Q5BKY6 102 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 TMEM211Q6ICI0 200 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 MITD1Q8WV92 249 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 MICU1Q9BPX6 476 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 SULT4A1Q9BR01 284 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 RTL8AQ9BWD3 113 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 NECAP2Q9NVZ3 263 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 ZNF230Q9UIE0 474 aaPredicted RBP13.46□□□□□ -0.26
SNX13-204ENST00000444712 OSGIN2Q9Y236 505 aa13.46□□□□□ -0.26
SNX13-204ENST00000444712 ZNHIT1O43257 154 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 DUS4LO95620 317 aaKnown RBP13.45□□□□□ -0.26
SNX13-204ENST00000444712 FCGR3AP08637 254 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 ZNF35P13682 527 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 BCL3P20749 454 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 GTF3C1Q12789 2109 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 FOXF2Q12947 444 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 IL24Q13007 206 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 PPP1R1AQ13522 171 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 FAM169BQ8N8A8 192 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 BHLHE23Q8NDY6 225 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 SLAMF9Q96A28 289 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 OR51B6Q9H340 312 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 ZNF286AQ9HBT8 521 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 C12orf4Q9NQ89 552 aa13.45□□□□□ -0.26
SNX13-204ENST00000444712 RIF1Q5UIP0 2472 aaKnown RBP13.45□□□□□ -0.26
SNX13-204ENST00000444712 G3V3Q6 166 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 OR7C1O76099 320 aaPredicted RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 CGAP01215 116 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 CELA3BP08861 270 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 HLA-GP17693 338 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 IL32P24001 234 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 TIMP3P35625 211 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 UCP2P55851 309 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 H2BFSP57053 126 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 SNRPD2P62316 118 aaKnown RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 FGL1Q08830 312 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 PLEKHN1Q494U1 663 aaPredicted RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 C17orf107Q6ZR85 190 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 WDR31Q8NA23 367 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 OR5M8Q8NGP6 311 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 OR13G1Q8NGZ3 307 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 DHRS9Q9BPW9 319 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 SCNM1Q9BWG6 230 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 FGF23Q9GZV9 251 aaPredicted RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 ZNF442Q9H7R0 627 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 SPACA1Q9HBV2 294 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 ZNF71Q9NQZ8 489 aaPredicted RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 FAM186AA6NE01 2351 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 IQCF6A8MYZ5 107 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 TOXO94900 526 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 AKR1C4P17516 323 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 VAMP1P23763 118 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 NPBWR2P48146 333 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 SRSF4Q08170 494 aaKnown RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 C1QTNF12Q5T7M4 302 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 BHLHA15Q7RTS1 189 aaPredicted RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 CXorf67Q86X51 503 aaPredicted RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 ZNF610Q8N9Z0 462 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 OR1J1Q8NGS3 322 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 FAM210AQ96ND0 272 aa13.44□□□□□ -0.26
SNX13-204ENST00000444712 C14orf166Q9Y224 244 aaKnown RBP13.44□□□□□ -0.26
SNX13-204ENST00000444712 A0A0B4J2A0 478 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 A0A1W2PR80 420 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 HMSDA8MTL9 139 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 J3QT63 122 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 PPP3CBP16298 524 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 NPY4RP50391 375 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 IL13RA2Q14627 380 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 SRSF7Q16629 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNX13-204ENST00000444712 HAGHLQ6PII5 290 aaPredicted RBP13.43□□□□□ -0.26
SNX13-204ENST00000444712 MYPOPQ86VE0 399 aaPredicted RBP13.43□□□□□ -0.26
SNX13-204ENST00000444712 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 Q8IYB0 196 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 MAFIPQ8WZ33 124 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 BCL2L14Q9BZR8 327 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 OR2J1Q9GZK6 312 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 CLEC4MQ9H2X3 399 aaPredicted RBP13.43□□□□□ -0.26
SNX13-204ENST00000444712 FN3KRPQ9HA64 309 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 CRIM1Q9NZV1 1036 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 ZNF629Q9UEG4 869 aaPredicted RBP13.43□□□□□ -0.26
SNX13-204ENST00000444712 SHPKQ9UHJ6 478 aa13.43□□□□□ -0.26
SNX13-204ENST00000444712 LRP5LA4QPB2 252 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 SDCBPO00560 298 aaPredicted RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 CA6P23280 308 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 ZNF81P51508 661 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 NHLH1Q02575 133 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 C2orf68Q2NKX9 166 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 LGALSLQ3ZCW2 172 aaPredicted RBP13.42□□□□□ -0.26
SNX13-204ENST00000444712 SPATA46Q5T0L3 261 aa13.42□□□□□ -0.26
SNX13-204ENST00000444712 AADACL3Q5VUY0 350 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms