RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	VCX	Q9H320	206 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	ZCCHC4	Q9H5U6	513 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	PLCXD1	Q9NUJ7	323 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677	DHDH	Q9UQ10	334 aa		11.14	□□□□□ -0.63
GARNL3-208	ENST00000444677		A0A0A6YYJ9	748 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	IRGM	A1A4Y4	181 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	EFCAB10	A6NFE3	127 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	PIP	P12273	146 aa	Predicted RBP	11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	MYL12A	P19105	171 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	PRKACB	P22694	351 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	DUSP1	P28562	367 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	SNU13	P55769	128 aa	Known RBP	11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	CAV3	P56539	151 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	COL10A1	Q03692	680 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	DEFB112	Q30KQ8	113 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	METTL11B	Q5VVY1	283 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	LHFPL2	Q6ZUX7	228 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	VMO1	Q7Z5L0	202 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	OR4M1	Q8NGD0	313 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	OR51A2	Q8NGJ7	313 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	C8orf46	Q8TAG6	207 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	TSEN15	Q8WW01	171 aa	Known RBP	11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	OPALIN	Q96PE5	141 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	SIRT7	Q9NRC8	400 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	C19orf12	Q9NSK7	152 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	RBFOX1	Q9NWB1	397 aa	Known RBP	11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	FKBP14	Q9NWM8	211 aa		11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	CHCHD3	Q9NX63	227 aa	Known RBP	11.13	□□□□□ -0.63
GARNL3-208	ENST00000444677	PNMA8C	A0A1B0GUJ8	204 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677		A0A1W2PRD5	423 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677		A0A1W2PRF3	423 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677		A0A1W2PRM7	423 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	MEX3A	A1L020	520 aa	Known RBP	11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	GPR37	O15354	613 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	KNG1	P01042	644 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	MT-ND2	P03891	347 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	ERVFRD-1	P60508	538 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	PDZK1IP1	Q13113	114 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	KLRD1	Q13241	179 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	C11orf91	Q3C1V1	193 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	CCDC58	Q4VC31	144 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	C6orf141	Q5SZD1	244 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	GPR157	Q5UAW9	335 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	DMKN	Q6E0U4	476 aa	Predicted RBP	11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	C9orf139	Q6ZV77	190 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	SERPINA12	Q8IW75	414 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	FAM185A	Q8N0U4	392 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	STX19	Q8N4C7	294 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	PARP16	Q8N5Y8	322 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	OR52N1	Q8NH53	320 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	EMG1	Q92979	244 aa	Known RBP	11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	SPSB1	Q96BD6	273 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	TAS2R4	Q9NYW5	299 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	CNOT2	Q9NZN8	540 aa	Known RBP	11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677	KPTN	Q9Y664	436 aa		11.12	□□□□□ -0.63
GARNL3-208	ENST00000444677		A0A1W2PQ09	198 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	TMEM82	A0PJX8	343 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677		H0YJX3	145 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	SULT1B1	O43704	296 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	TK1	P04183	234 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	RPSA	P08865	295 aa	Known RBP	11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	OCM2	P0CE71	109 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	OCM	P0CE72	109 aa	Predicted RBP	11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	PRKACA	P17612	351 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	UBA52	P62987	128 aa	Known RBP	11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	BAMBI	Q13145	260 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	PDCD1	Q15116	288 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	MKX	Q8IYA7	352 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	FAM58A	Q8N1B3	248 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	PNKD	Q8N490	385 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	ZNF561	Q8N587	486 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	OR52N4	Q8NGI2	321 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	OR5D14	Q8NGL3	314 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	GPR148	Q8TDV2	347 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	TAF15	Q92804	592 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	GHSR	Q92847	366 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	TNFRSF14	Q92956	283 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	ZNF281	Q9Y2X9	895 aa		11.11	□□□□□ -0.63
GARNL3-208	ENST00000444677	IGHV1-69D	A0A0B4J2H0	117 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	DNAJC9-AS1	A6NH13	148 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	PTGES3L	E9PB15	166 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677		H0YHG0	523 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	RNASEK-C17orf49	H0YIS7	233 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	SLC1A7	O00341	560 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	ZNF737	O75373	536 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	IGHV1-69	P01742	117 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	CHRM2	P08172	466 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	HCK	P08631	526 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	ZP1	P60852	638 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	RPS11	P62280	158 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	TMEM200B	Q69YZ2	307 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	ZNF529	Q6P280	563 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	RBMS3	Q6XE24	437 aa	Known RBP	11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	C17orf107	Q6ZR85	190 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	PIP4P2	Q8N4L2	257 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	NANOGP1	Q8N7R0	232 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	ASCC1	Q8N9N2	400 aa	Known RBP	11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	HAVCR2	Q8TDQ0	301 aa		11.1	□□□□□ -0.63
GARNL3-208	ENST00000444677	SMIM19	Q96E16	107 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms