RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 LSM11P83369 360 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SRSF3P84103 164 aaKnown RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 MLC1Q15049 377 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 TMEM164Q5U3C3 297 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 ZNF770Q6IQ21 691 aaPredicted RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SLC48A1Q6P1K1 146 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 FAM57BQ71RH2 274 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 OR5D18Q8NGL1 313 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 ADAT3Q96EY9 351 aaPredicted RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 VCX2Q9H322 139 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 EPHX3Q9H6B9 360 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 ST6GALNAC2Q9UJ37 374 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 TRAPPC2LQ9UL33 140 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 SIGLEC7Q9Y286 467 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 CCL27Q9Y4X3 112 aa4.59□□□□□ -1.67
SCN11A-202ENST00000444237 DDX60LQ5H9U9 1706 aaKnown RBP4.59□□□□□ -1.67
SCN11A-202ENST00000444237 A0A0A6YYC8 382 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 NKX6-3A6NJ46 265 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 I3L1I5 382 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 PLPP1O14494 284 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 TOX3O15405 576 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 OR7C1O76099 320 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ONECUT2O95948 504 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 CYC1P08574 325 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 HLA-GP17693 338 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 PTGER1P34995 402 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 TFPI2P48307 235 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 DYNLT3P51808 116 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 UBE2G1P62253 170 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 PMP22Q01453 160 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 VASH2Q86V25 355 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ADAD2Q8NCV1 583 aaKnown RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 OR5A1Q8NGJ0 315 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ZNRF4Q8WWF5 429 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 PTX4Q96A99 478 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 SLC25A38Q96DW6 304 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 C16orf70Q9BSU1 422 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 FKRPQ9H9S5 495 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 SLC2A4RGQ9NR83 387 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 GLRX2Q9NS18 164 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 WSB2Q9NYS7 404 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF835Q9Y2P0 537 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 SSC5DA1L4H1 1573 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 DNAJC25-GNG10A0A024R161 153 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 UBE2L5PA0A1B0GUS4 154 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 FBLL1A6NHQ2 334 aaKnown RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 LEFTY2O00292 366 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF264O43296 627 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 GJB3O75712 270 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 FGF8P55075 233 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF117Q03924 483 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 PLCXD2Q0VAA5 305 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 NNATQ16517 81 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 C10orf111Q8N326 155 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 OR10S1Q8NGN2 331 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 OR4X1Q8NH49 305 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 SGMS2Q8NHU3 365 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ABHD3Q8WU67 409 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 HSD17B8Q92506 261 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF385AQ96PM9 386 aaKnown RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 PSMG3Q9BT73 122 aaPredicted RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 CPEB1Q9BZB8 566 aaKnown RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 TMEM106BQ9NUM4 274 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ABI3Q9P2A4 366 aa4.59□□□□□ -1.68
SCN11A-202ENST00000444237 ZNF346Q9UL40 294 aaKnown RBP4.59□□□□□ -1.68
SCN11A-202ENST00000444237 TRAV36DV7A0A075B6V5 113 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 C11orf94C9JXX5 98 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 NXPH2O95156 264 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 PEX11BO96011 259 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 SLC25A6P12236 298 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 IRF2P14316 349 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 HOXD9P28356 352 aaPredicted RBP4.58□□□□□ -1.68
SCN11A-202ENST00000444237 PPP1CCP36873 323 aaKnown RBP4.58□□□□□ -1.68
SCN11A-202ENST00000444237 IER3P46695 156 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 LIMS1P48059 325 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 PNKDQ8N490 385 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 OR11L1Q8NGX0 322 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 SPPL3Q8TCT6 385 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 KIR3DX1Q9H7L2 352 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 SEPSECSQ9HD40 501 aaKnown RBP4.58□□□□□ -1.68
SCN11A-202ENST00000444237 SEMA5BQ9P283 1151 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 CLN8Q9UBY8 286 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 SLC22A13Q9Y226 551 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 KCNE1BA0A087WTH5 132 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 DPRXA6NFQ7 191 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 SERINC4A6NH21 518 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 OTOL1A6NHN0 477 aaPredicted RBP4.58□□□□□ -1.68
SCN11A-202ENST00000444237 HSD17B6O14756 317 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 OR5AL1P0C617 328 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 MPZP25189 248 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 KIAA0895LQ68EN5 471 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.58□□□□□ -1.68
SCN11A-202ENST00000444237 FAM219AQ8IW50 185 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 DMBX1Q8NFW5 382 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 RNASEH2CQ8TDP1 164 aaKnown RBP4.58□□□□□ -1.68
SCN11A-202ENST00000444237 RNF133Q8WVZ7 376 aa4.58□□□□□ -1.68
SCN11A-202ENST00000444237 ALG14Q96F25 216 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms