RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ZNF503-AS2A6NEH8 195 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 HMSDA8MTL9 139 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 LMX1BO60663 402 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ANOS1P23352 680 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 PDZK1IP1Q13113 114 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF660Q6AZW8 331 aaPredicted RBP7.01□□□□□ -1.29
CCDC39-201ENST00000442201 GABRG1Q8N1C3 465 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF610Q8N9Z0 462 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 CCDC54Q8NEL0 328 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 OR2T35Q8NGX2 323 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF671Q8TAW3 534 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 GFI1Q99684 422 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 PIGMQ9H3S5 423 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 NOX3Q9HBY0 568 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 SPTA1P02549 2419 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 A0A087X0M5 115 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 A0A1B0GX30 115 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 A0A1W2PPE3 182 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 C5orf63A6NC05 138 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 E9PLN8 166 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 CGAP01215 116 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 IGLV3-1P01715 115 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 IGFBP3P17936 291 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 COX5AP20674 150 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 S100A11P31949 105 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 CEACAM8P31997 349 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 EVX1P49640 407 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 HGFACQ04756 655 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 P2RY6Q15077 328 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 GABRA6Q16445 453 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SNAI3Q3KNW1 292 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 HACD4Q5VWC8 232 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ASPHD2Q6ICH7 369 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 PLPP7Q8NBV4 271 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 NAXEQ8NCW5 288 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 DNAAF1Q8NEP3 725 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 C1orf162Q8NEQ5 155 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 OR5D14Q8NGL3 314 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 OR1J2Q8NGS2 313 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 THAP6Q8TBB0 222 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ADAT3Q96EY9 351 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 MRI1Q9BV20 369 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SFXN3Q9BWM7 321 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF835Q9Y2P0 537 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 NCOA6Q14686 2063 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 LOC100509620A0A075B734 347 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 LDLRAD4O15165 306 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 DLEU1O43261 78 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SIX6O95475 246 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 GLI4P10075 376 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 CCNOP22674 350 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ST3GAL2Q16842 350 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 RNASE10Q5GAN6 216 aaKnown RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 GLT8D1Q68CQ7 371 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SAMD12Q8N8I0 201 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 PIPOXQ9P0Z9 390 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF391Q9UJN7 358 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 KCNIP3Q9Y2W7 256 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 FREM1Q5H8C1 2179 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ATMQ13315 3056 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 C5orf49A4QMS7 147 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 CXorf65A6NEN9 183 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 A6NIN4 97 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 AP4M1O00189 453 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 DHRS3O75911 302 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SNRPBP14678 240 aaKnown RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 NFYAP23511 347 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 APLNRP35414 380 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 RAB5CP51148 216 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 RBX1P62877 108 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 CNIH2Q6PI25 160 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 MDP1Q86V88 176 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SPICQ8N5J4 248 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 OR14K1Q8NGZ2 314 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 MALSU1Q96EH3 234 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 ELMOD3Q96FG2 381 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 BSCL2Q96G97 398 aaPredicted RBP7□□□□□ -1.29
CCDC39-201ENST00000442201 LYZL4Q96KX0 146 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 CHST5Q9GZS9 411 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 RGCCQ9H4X1 137 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 RASL12Q9NYN1 266 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 GOLT1BQ9Y3E0 138 aa7□□□□□ -1.29
CCDC39-201ENST00000442201 SPOCK1Q08629 439 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 OR8G1Q15617 311 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 C11orf88Q6PI97 169 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 LRRC28Q86X40 367 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-201ENST00000442201 OR51A2Q8NGJ7 313 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 OR13C9Q8NGT0 318 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 OR2AE1Q8NHA4 323 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 REEP6Q96HR9 211 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 BOD1Q96IK1 185 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 POM121L2Q96KW2 1035 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 C7orf50Q9BRJ6 194 aaKnown RBP6.99□□□□□ -1.29
CCDC39-201ENST00000442201 C1QTNF5Q9BXJ0 243 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 TMEM138Q9NPI0 162 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 NPDC1Q9NQX5 325 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-201ENST00000442201 SIRT7Q9NRC8 400 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 MED12LQ86YW9 2145 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 XRCC2O43543 280 aa6.99□□□□□ -1.29
CCDC39-201ENST00000442201 ERCC1P07992 297 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms