RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 YTHDF1Q9BYJ9 559 aaKnown RBP9.8□□□□□ -0.84
HSPG2-206ENST00000439717 CCDC90BQ9GZT6 254 aa9.8□□□□□ -0.84
HSPG2-206ENST00000439717 SEBOXQ9HB31 216 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-206ENST00000439717 TMEM138Q9NPI0 162 aa9.8□□□□□ -0.84
HSPG2-206ENST00000439717 SLC25A10Q9UBX3 287 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-206ENST00000439717 TRBV5-7A0A0A0MS05 114 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 PNMA8CA0A1B0GUJ8 204 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 A0A1B0GW55 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 FCN3O75636 299 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 KDM4BO94953 1096 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L2P0CJ85 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L3P0CJ86 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L4P0CJ87 422 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L5P0CJ88 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L6P0CJ89 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L7P0CJ90 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 IGFBP3P17936 291 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 FSTP19883 344 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 MAPK3P27361 379 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 CAV3P56539 151 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 ZP1P60852 638 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DOC2BQ14184 412 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 TBCEQ15813 527 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DGUOKQ16854 277 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 KRTAP21-3Q3LHN1 58 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 CRIP3Q6Q6R5 217 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4L9Q6RFH8 374 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 FAM58AQ8N1B3 248 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 CD177Q8N6Q3 437 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 LY6G5BQ8NDX9 201 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 UFD1Q92890 307 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 EMG1Q92979 244 aaKnown RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 RFT1Q96AA3 541 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 SPACA5Q96QH8 159 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 DUX4Q9UBX2 424 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 RPUSD1Q9UJJ7 312 aaKnown RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 MAB21L2Q9Y586 359 aa9.79□□□□□ -0.84
HSPG2-206ENST00000439717 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
HSPG2-206ENST00000439717 F8VVB4 439 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 F8VWA3 439 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 SPRY1O43609 319 aaPredicted RBP9.78□□□□□ -0.84
HSPG2-206ENST00000439717 FSHBP01225 129 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TFF1P04155 84 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 CHRM2P08172 466 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TMEM225BP0DP42 221 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 SELLP14151 372 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 BCL3P20749 454 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 BDKRB2P30411 391 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TGFBR2P37173 567 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 NPBWR2P48146 333 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 BMXP51813 675 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 MLLT11Q13015 90 aaPredicted RBP9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TPBGQ13641 420 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 ZNF146Q15072 292 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TRAM1Q15629 374 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 SPIN3Q5JUX0 258 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 UNQ9370/PRO34162Q6UXP9 181 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 BATF2Q8N1L9 274 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 ZNRF1Q8ND25 227 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TMEM185AQ8NFB2 350 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 PXT1Q8NFP0 134 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 OR52N4Q8NGI2 321 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 OR51A2Q8NGJ7 313 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 C8orf46Q8TAG6 207 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 UPRTQ96BW1 309 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 DERL3Q96Q80 235 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 OR14A2Q96R54 314 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 GPER1Q99527 375 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 DCTN5Q9BTE1 182 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 FAM234AQ9H0X4 552 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 CNTD2Q9H8S5 307 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 HMG20AQ9NP66 347 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 OR14J1Q9UGF5 321 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 GLS2Q9UI32 602 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 FOXJ3Q9UPW0 622 aa9.78□□□□□ -0.84
HSPG2-206ENST00000439717 TRBV23-1A0A0A0MS06 115 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 IGKV1-12A0A0C4DH73 117 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 ANGPTL7O43827 346 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 INMTO95050 263 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 IGKV1D-12P01611 117 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 HSMCR30P0CW71 290 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 CPEP16870 476 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 NDUFB7P17568 137 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 ADRA2CP18825 462 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 ZNF93P35789 620 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-206ENST00000439717 CAPZA1P52907 286 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 ACSM3Q53FZ2 586 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 ARMCX4Q5H9R4 360 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 DDI2Q5TDH0 399 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 LIPKQ5VXJ0 399 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 ZNF367Q7RTV3 350 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 RNF144BQ7Z419 303 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 SATL1Q86VE3 508 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 PRIMA1Q86XR5 153 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 CDH26Q8IXH8 852 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 FGFRL1Q8N441 504 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 SVOPQ8N4V2 548 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 OR5D18Q8NGL1 313 aa9.77□□□□□ -0.85
HSPG2-206ENST00000439717 H1FXQ92522 213 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms