RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 DEFB108AA8MXU0 73 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 SULT1C2O00338 296 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 PLATP00750 562 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 NRASP01111 189 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 AKAIN1P0CW23 69 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CA6P23280 308 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 ACTBP60709 375 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 ACTG1P63261 375 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 PLA2G7Q13093 441 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CLVS2Q5SYC1 327 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CRIP3Q6Q6R5 217 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 MOB3CQ70IA8 216 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 SPERTQ8NA61 448 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 OR10AD1Q8NGE0 317 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 GCDHQ92947 438 aaPredicted RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 RBPMSQ93062 196 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 PIK3IP1Q96FE7 263 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 ELMOD3Q96FG2 381 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 GINS4Q9BRT9 223 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 TMEM138Q9NPI0 162 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CA10Q9NS85 328 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 PIPOXQ9P0Z9 390 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 DUSP13Q9UII6 198 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 PURGQ9UJV8 347 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 ATP23Q9Y6H3 246 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 DOPEY1Q5JWR5 2465 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 IGKV1-27A0A075B6S5 117 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 FAM230AA0A1W2PPH8 454 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 SHISA9B4DS77 424 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 MCRIP1C9JLW8 97 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 TIMM8AO60220 97 aaPredicted RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 CTAG2O75638 210 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 RP2O75695 350 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 MELTFP08582 738 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 RAC2P15153 192 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 ANXA7P20073 488 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 GCH1P30793 250 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 S100A11P31949 105 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 PRSS3P35030 304 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 OR3A4PP47883 348 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CAPZA1P52907 286 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 SEC61A1P61619 476 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 TAGLNQ01995 201 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 RAB11BQ15907 218 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 MBNL2Q5VZF2 373 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 LYPD6Q86Y78 171 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CDH26Q8IXH8 852 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CCDC54Q8NEL0 328 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 OR4D6Q8NGJ1 314 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 CCDC107Q8WV48 283 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 C10orf35Q96D05 121 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 MRPL37Q9BZE1 423 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 ALX4Q9H161 411 aaPredicted RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 ESRP2Q9H6T0 727 aaKnown RBP8.54□□□□□ -1.04
CBX5-202ENST00000439541 CNTD2Q9H8S5 307 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 MSL2Q9HCI7 577 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 NGBQ9NPG2 151 aa8.54□□□□□ -1.04
CBX5-202ENST00000439541 A0A0A6YYH2 397 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 LOC100289279A0A1B0GTE1 492 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 A0A1B0GW55 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 hCG_1807616A0A1W2PRN6 198 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 A6NJ64 397 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 ANKRD30BLA7E2S9 258 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 IQCF6A8MYZ5 107 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 H0YL77 283 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 SLC17A2O00624 439 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 BET1O15155 118 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 B3GALNT1O75752 331 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 CD3EP07766 207 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 SELEP16581 610 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 GLRXP35754 106 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 ZNF93P35789 620 aaPredicted RBP8.53□□□□□ -1.04
CBX5-202ENST00000439541 RBMXP38159 391 aaKnown RBP8.53□□□□□ -1.04
CBX5-202ENST00000439541 ZNF718Q3SXZ3 478 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 GLT8D1Q68CQ7 371 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 UNQ6126/PRO20091Q6UXV3 157 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 Q6ZR03 302 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 SSX8Q7RTT4 187 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 SLC36A1Q7Z2H8 476 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 ZDHHC23Q8IYP9 409 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 BATF2Q8N1L9 274 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 NKAIN3Q8N8D7 197 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 CSNK2A3Q8NEV1 391 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 NUP37Q8NFH4 326 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 SSC4DQ8WTU2 575 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 ADAT1Q9BUB4 502 aaKnown RBP8.53□□□□□ -1.04
CBX5-202ENST00000439541 PPA2Q9H2U2 334 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 SCPEP1Q9HB40 452 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 PFDN2Q9UHV9 154 aa8.53□□□□□ -1.04
CBX5-202ENST00000439541 ZNF107Q9UII5 783 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms