RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 LIME1Q9H400 295 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 OR5V1Q9UGF6 321 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 A0A0A6YYH2 397 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 TRAV38-1A0A0B4J264 116 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 METTL21EPA6NDL7 271 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 A6NJ64 397 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 LGALS8O00214 317 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 NDUFA2O43678 99 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 CDC14BO60729 498 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 CRTAPO75718 401 aaPredicted RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 HTR3BO95264 441 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 SFTPBP07988 381 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 SNRPBP14678 240 aaKnown RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 MGMTP16455 207 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 CPT2P23786 658 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 GIFP27352 417 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 NPBWR2P48146 333 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 ATP5J2P56134 94 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 RPS27AP62979 156 aaKnown RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 ZNF146Q15072 292 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 MPV17LQ2QL34 196 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 DEFB113Q30KQ7 82 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 UBE2NLQ5JXB2 153 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 ACP7Q6ZNF0 438 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 RAB1CQ92928 201 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 Q96M66 194 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 NKX3-1Q99801 234 aaPredicted RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 NUDT16L1Q9BRJ7 211 aaKnown RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 ABCG5Q9H222 651 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 IFT22Q9H7X7 185 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 RBFOX1Q9NWB1 397 aaKnown RBP10.66□□□□□ -0.7
SCLT1-202ENST00000439369 GLS2Q9UI32 602 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 ADAM30Q9UKF2 790 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 CACNG2Q9Y698 323 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
SCLT1-202ENST00000439369 PPIAL4EA0A075B759 164 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM272A0A1B0GTI8 110 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 OOEPA6NGQ2 149 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 PPIAL4DF5H284 164 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 CYB5R3P00387 301 aaPredicted RBP10.65□□□□□ -0.7
SCLT1-202ENST00000439369 PAHP00439 452 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 APOA1P02647 267 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 PPIAL4FP0DN26 164 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 PRKACAP17612 351 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 SERPINA2P20848 420 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 COL8A2P25067 703 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 PDLIM4P50479 330 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 ART1P52961 327 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 UNC119Q13432 240 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 MICBQ29980 383 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 RAB12Q6IQ22 244 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 MUC20Q8N307 709 aaPredicted RBP10.65□□□□□ -0.7
SCLT1-202ENST00000439369 FAM89BQ8N5H3 189 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM104Q8NE00 496 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 NRGNQ92686 78 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 SPACA1Q9HBV2 294 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 NLKQ9UBE8 527 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 DNAJB11Q9UBS4 358 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 ST3GAL6Q9Y274 331 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 PPIAL4AQ9Y536 164 aa10.65□□□□□ -0.7
SCLT1-202ENST00000439369 A0A0B4J203 849 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 F8VVB4 439 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 F8VWA3 439 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 SH2D1BO14796 132 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 WNT9BO14905 357 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 NDUFS7O75251 213 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 CLPXO76031 633 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 TPPPO94811 219 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 MPIG6BO95866 241 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 IGHV2-70P01814 119 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 GLAP06280 429 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 CHRM2P08172 466 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 EGR1P18146 543 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 MDH2P40926 338 aaKnown RBP10.64□□□□□ -0.71
SCLT1-202ENST00000439369 BTG1P62324 171 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 ARL6IP1Q15041 203 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-202ENST00000439369 STUMQ69YW2 141 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 CLEC2AQ6UVW9 174 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 LRRC28Q86X40 367 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-202ENST00000439369 SAMD12Q8N8I0 201 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 CHST4Q8NCG5 386 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 OR56B1Q8NGI3 324 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 OR10K1Q8NGX5 313 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 FAM46BQ96A09 425 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 SLC25A38Q96DW6 304 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 SELENOIQ9C0D9 397 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 LPAR5Q9H1C0 372 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 COMMD3Q9UBI1 195 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 WIPI2Q9Y4P8 454 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 PEX16Q9Y5Y5 336 aa10.64□□□□□ -0.71
SCLT1-202ENST00000439369 DYSFO75923 2080 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 OR2AT4A6NND4 320 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 LMO1P25800 156 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 CD80P33681 288 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms