RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TM2D1Q9BX74 207 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 LPAR5Q9H1C0 372 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 ATG5Q9H1Y0 275 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 EDARQ9UNE0 448 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 ST3GAL6Q9Y274 331 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 F8VVB4 439 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 F8VWA3 439 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 LHBP01229 141 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 ELK1P19419 428 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 EFNA4P52798 201 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 IL13RA2Q14627 380 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 SPIN3Q5JUX0 258 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 ACP7Q6ZNF0 438 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 LINC00596Q86U02 117 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A1Q86YD7 464 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 CMTM4Q8IZR5 234 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 BOLLQ8N9W6 283 aaKnown RBP17.43■□□□□ 0.38
CHD3-204ENST00000439235 OR56B1Q8NGI3 324 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 OR51T1Q8NGJ9 327 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 S100A16Q96FQ6 103 aaKnown RBP17.43■□□□□ 0.38
CHD3-204ENST00000439235 GAL3ST1Q99999 423 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 DIABLOQ9NR28 239 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 TREM2Q9NZC2 230 aa17.43■□□□□ 0.38
CHD3-204ENST00000439235 A0A0A6YYH2 397 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A10PA6NDY2 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A18PA6NE21 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A16PA6NEW6 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A20PA6NIJ5 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 A6NJ64 397 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A8PA6NJQ4 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A7PA6NKC0 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A22PA8MWA6 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A12PA8MX19 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A5PA8MXJ8 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A23PA8MXZ1 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 CYB5R3P00387 301 aaPredicted RBP17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A15PP0C7V4 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A13PP0C7W8 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A14PP0C7W9 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 FAM90A24PP0C7X0 464 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 EGR1P18146 543 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 TNFSF8P32971 234 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 GMFBP60983 142 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 RAB12Q6IQ22 244 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 DIRAS2Q96HU8 199 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 EXTL2Q9UBQ6 330 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 DNAJB11Q9UBS4 358 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 GLS2Q9UI32 602 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 CACNG2Q9Y698 323 aa17.42■□□□□ 0.38
CHD3-204ENST00000439235 TMEM178BH3BS89 294 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 H3BUI4 141 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 WNT9BO14905 357 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 F12P00748 615 aaPredicted RBP17.41■□□□□ 0.38
CHD3-204ENST00000439235 KNG1P01042 644 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 CHRM2P08172 466 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 DAOP14920 347 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 CD80P33681 288 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 PITPNBP48739 271 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 SNU13P55769 128 aaKnown RBP17.41■□□□□ 0.38
CHD3-204ENST00000439235 MPV17LQ2QL34 196 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 PIGYQ3MUY2 71 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 CNIH2Q6PI25 160 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 NUDT16L1Q9BRJ7 211 aaKnown RBP17.41■□□□□ 0.38
CHD3-204ENST00000439235 WDR13Q9H1Z4 485 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 NLKQ9UBE8 527 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 ABCA4P78363 2273 aa17.41■□□□□ 0.38
CHD3-204ENST00000439235 PKDREJQ9NTG1 2253 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 GABRR1P24046 479 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 VEGFCP49767 419 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 ZNF146Q15072 292 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 SPANXN2Q5MJ10 180 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 HIST2H2BCQ6DN03 193 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 BAIAP2L2Q6UXY1 529 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 CCDC190Q86UF4 302 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 TGIF2LYQ8IUE0 185 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 FAM89BQ8N5H3 189 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 OR4M1Q8NGD0 313 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 YIPF5Q969M3 257 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 NICN1Q9BSH3 213 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 BARX1Q9HBU1 254 aaPredicted RBP17.4■□□□□ 0.38
CHD3-204ENST00000439235 MYOZ1Q9NP98 299 aaPredicted RBP17.4■□□□□ 0.38
CHD3-204ENST00000439235 ICE1Q9Y2F5 2266 aa17.4■□□□□ 0.38
CHD3-204ENST00000439235 ARFGEF3Q5TH69 2177 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 DOPEY2Q9Y3R5 2298 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 CLDN25C9JDP6 229 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 LGALS8O00214 317 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 GEMIN2O14893 280 aaKnown RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 RP2O75695 350 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 MUC1P15941 1255 aaPredicted RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 CDK2P24941 298 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 IKZF1Q13422 519 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 TAF9Q16594 264 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 TEX36Q5VZQ5 186 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 METAP1DQ6UB28 335 aaPredicted RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 PEG10Q86TG7 708 aaKnown RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 OR10R2Q8NGX6 335 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 S100ZQ8WXG8 99 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 TSC22D3Q99576 134 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 LIME1Q9H400 295 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms