RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ANAPC7Q9UJX3 599 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 RASD1Q9Y272 281 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 GSTK1Q9Y2Q3 226 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SIGLEC9Q9Y336 463 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 UTP11Q9Y3A2 253 aaKnown RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TANC2Q9HCD6 1990 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 hCG_1818297A0A087WSY0 165 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 GMNCA6NCL1 334 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR6C65A6NJZ3 312 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PDZK1P1A8MUH7 402 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 VGLL3A8MV65 326 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 E7ESA3 106 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PIRO00625 290 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TAPBPO15533 448 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 RS1O15537 224 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 H6PDO95479 791 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TTC4O95801 387 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM107AO95990 144 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TNNC2P02585 160 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FTH1P02794 183 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ERCC1P07992 297 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 H2BFMP0C1H6 154 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TSPAN8P19075 237 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 SERPINA2P20848 420 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 IL32P24001 234 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CXCR2P25025 360 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 STOMP27105 288 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 RRM2P31350 389 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 NAA10P41227 235 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CDKN2BP42772 138 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 HCAR3P49019 387 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FABP6P51161 128 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PLA2G16P53816 162 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PLTPP55058 493 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CDH6P55285 790 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PLP1P60201 277 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 MYL6P60660 151 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 KCNJ2P63252 427 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 DR1Q01658 176 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC10A7Q0GE19 358 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 COTL1Q14019 142 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TFDP2Q14188 446 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PDK2Q15119 407 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PSG3Q16557 428 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 NDUFA9Q16795 377 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 MICBQ29980 383 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TTMPQ5BVD1 217 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 KLF17Q5JT82 389 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 NCMAPQ5T1S8 102 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PDZK1Q5T2W1 519 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ACSM5Q6NUN0 579 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM53Q6P2H8 277 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CCDC137Q6PK04 289 aaKnown RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FRA10AC1Q70Z53 315 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 MOB3BQ86TA1 216 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 VRK2Q86Y07 508 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CRLF3Q8IUI8 442 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 C1orf174Q8IYL3 243 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF100Q8IYN0 542 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF101Q8IZC7 436 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 GABRG1Q8N1C3 465 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 RIBC1Q8N443 379 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 DHRSXQ8N5I4 330 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF557Q8N988 423 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF565Q8N9K5 539 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FNDC5Q8NAU1 212 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 MFSD9Q8NBP5 474 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PROKR2Q8NFJ6 384 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR10A7Q8NGE5 316 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR4D5Q8NGN0 318 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 NDNFQ8TB73 568 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CXorf40AQ8TE69 158 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZCCHC13Q8WW36 166 aaKnown RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 IFT81Q8WYA0 676 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 DCUN1D4Q92564 292 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 MRGPRFQ96AM1 343 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 PPP1R14BQ96C90 147 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 SNF8Q96H20 258 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ANKRD36BP1Q96IX9 119 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 HSFY1Q96LI6 401 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF317Q96PQ6 595 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CSPG4P5Q96PW8 444 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 CYTH2Q99418 400 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FMO2Q99518 471 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 COPS8Q99627 209 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 GOLPH3Q9H4A6 298 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 FBXO44Q9H4M3 255 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ELOVL6Q9H5J4 265 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZDHHC11Q9H8X9 412 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 WDR54Q9H977 334 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 UCK1Q9HA47 277 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM165Q9HC07 324 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 LYRM4Q9HD34 91 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 RAB18Q9NP72 206 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 NT5MQ9NPB1 228 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 ACP6Q9NPH0 428 aa1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 C20orf96Q9NUD7 363 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 IMP3Q9NV31 184 aaKnown RBP1.47□□□□□ -2.17
HMGB1P18-201ENST00000438801 LYARQ9NX58 379 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms