RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 MITD1Q8WV92 249 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 SPTSSAQ969W0 71 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 S100A13Q99584 98 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 GPR173Q9NS66 373 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 FREM1Q5H8C1 2179 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 CYTIPO60759 359 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF708P17019 499 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 ACKR3P25106 362 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 SNRPEP62304 92 aaKnown RBP12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 MRPS34P82930 218 aaKnown RBP12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 IGSF11Q5DX21 431 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 UQCC3Q6UW78 93 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 INO80EQ8NBZ0 244 aaPredicted RBP12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 NAXEQ8NCW5 288 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 AKR7LQ8NHP1 331 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 INTS12Q96CB8 462 aaKnown RBP12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 PHYHIPLQ96FC7 376 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 PIK3IP1Q96FE7 263 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 LIPGQ9Y5X9 500 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 MSGN1A6NI15 193 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 FGF16O43320 207 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 IL2RAP01589 272 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 IGHV3-9P01782 118 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 AMY2BP19961 511 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 TBPP20226 339 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 AKR1C3P42330 323 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 TNFSF10P50591 281 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 DEFB109BQ30KR1 87 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM178AQ8NBL3 297 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 TERB2Q8NHR7 220 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 ASB13Q8WXK3 278 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 PP6455Q8WZ26 134 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 SGK3Q96BR1 496 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 HRH4Q9H3N8 390 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 ACKR4Q9NPB9 350 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 AKAP13Q12802 2813 aa12.06□□□□□ -0.48
PTCHD3-201ENST00000438700 C5orf51A6NDU8 294 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 H0YIZ8 118 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 APOC1P02654 83 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 GABRR1P24046 479 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 SRSF4Q08170 494 aaKnown RBP12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 RNFT1Q5M7Z0 435 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 NKAPLQ5M9Q1 402 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 LPCAT3Q6P1A2 487 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 SPAG16Q8N0X2 631 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 OR5H2Q8NGV7 314 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 DCUN1D4Q92564 292 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 ANGPTL7O43827 346 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF32P17041 273 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 C3AR1Q16581 482 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 MST1LQ2TV78 715 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 GPR137CQ8N3F9 429 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 DEFB127Q9H1M4 99 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 C5orf66Q9H5L9 145 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 OR2S2Q9NQN1 319 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF701Q9NV72 531 aaPredicted RBP12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 UQCC1Q9NVA1 299 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM38BQ9NVV0 291 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 SPTBN2O15020 2390 aa12.05□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF891A8MT65 544 aaPredicted RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 AGPAT2O15120 278 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SYNGR3O43761 229 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 LCATP04180 440 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 FAM157CP0CG43 387 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CD79AP11912 226 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CRYGSP22914 178 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SERPINF1P36955 418 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SNU13P55769 128 aaKnown RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 MTCP1P56278 107 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 PMP22Q01453 160 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SLC9A3R2Q15599 337 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SWI5Q1ZZU3 235 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CEACAM16Q2WEN9 425 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 C10orf91Q5T1B1 145 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 C6orf201Q7Z4U5 140 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 ZSCAN4Q8NAM6 433 aaPredicted RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SEMA6DQ8NFY4 1073 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 REEP6Q96HR9 211 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 OCSTAMPQ9BR26 566 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 RNF126Q9BV68 326 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CYTL1Q9NRR1 136 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 ZFP57Q9NU63 452 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 CFAP47Q6ZTR5 3102 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 FAM230AA0A1W2PPH8 454 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 SPRY1O43609 319 aaPredicted RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 DUS4LO95620 317 aaKnown RBP12.04□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM225BP0DP42 221 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms