RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 Q6ZPA2 131 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 WIPF2Q8TF74 440 aaPredicted RBP14.64□□□□□ -0.07
GTF3A-204ENST00000438571 DNAJC9Q8WXX5 260 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 NRBF2Q96F24 287 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 OR5M11Q96RB7 305 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 CDCA4Q9BXL8 241 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 PKIBQ9C010 78 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 KRT84Q9NSB2 600 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 SNX5Q9Y5X3 404 aa14.64□□□□□ -0.07
GTF3A-204ENST00000438571 FBXO24O75426 580 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 IGHA1P01876 353 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 IGHV1-8P0DP01 117 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 EDDM3AQ14507 147 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 DNAL1Q4LDG9 190 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 LIAT1Q6ZQX7 453 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 CATSPERDQ86XM0 798 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 Q8N2B8 174 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 YIPF7Q8N8F6 280 aa14.63□□□□□ -0.07
GTF3A-204ENST00000438571 TBL2Q9Y4P3 447 aaKnown RBP14.63□□□□□ -0.07
GTF3A-204ENST00000438571 hCG_1809904A0A1W2PP81 198 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 A0A1W2PPE2 198 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 A0A1W2PR64 198 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 A0A1W2PRV1 198 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 ZNF728P0DKX0 622 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 HOXB6P17509 224 aaKnown RBP14.62□□□□□ -0.07
GTF3A-204ENST00000438571 CNN3Q15417 329 aaKnown RBP14.62□□□□□ -0.07
GTF3A-204ENST00000438571 BAIAP2L2Q6UXY1 529 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 OR8H2Q8N162 312 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 OR52N4Q8NGI2 321 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 CEP19Q96LK0 163 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 CITED2Q99967 270 aaPredicted RBP14.62□□□□□ -0.07
GTF3A-204ENST00000438571 CHST6Q9GZX3 395 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 PLEKHA1Q9HB21 404 aa14.62□□□□□ -0.07
GTF3A-204ENST00000438571 H2AFY2Q9P0M6 372 aaPredicted RBP14.62□□□□□ -0.07
GTF3A-204ENST00000438571 A0A1W2PQL4 384 aaPredicted RBP14.61□□□□□ -0.07
GTF3A-204ENST00000438571 DHRS7CA6NNS2 312 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 MMP23AO75900 390 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 CALCBP10092 127 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 POLR2IP36954 125 aaKnown RBP14.61□□□□□ -0.07
GTF3A-204ENST00000438571 BLCAPP62952 87 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 DYNC1I2Q13409 638 aaKnown RBP14.61□□□□□ -0.07
GTF3A-204ENST00000438571 FBLN7Q53RD9 439 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 SLC25A26Q70HW3 274 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 PRSS35Q8N3Z0 413 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 OR11H6Q8NGC7 330 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 OR13D1Q8NGV5 346 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 RPS4Y2Q8TD47 263 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 FOXRED1Q96CU9 486 aaPredicted RBP14.61□□□□□ -0.07
GTF3A-204ENST00000438571 MNTQ99583 582 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 PRRG3Q9BZD7 231 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 ABCB10Q9NRK6 738 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 HILPDAQ9Y5L2 63 aa14.61□□□□□ -0.07
GTF3A-204ENST00000438571 SYT7O43581 403 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 PSPNO60542 156 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 DNAJC8O75937 253 aaPredicted RBP14.6□□□□□ -0.07
GTF3A-204ENST00000438571 KRT8P05787 483 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 CHRM2P08172 466 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 DUSP1P28562 367 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 KIR3DL2P43630 455 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 NPBWR2P48146 333 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 SNU13P55769 128 aaKnown RBP14.6□□□□□ -0.07
GTF3A-204ENST00000438571 ACTA2P62736 377 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 ACTG2P63267 376 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 ACTC1P68032 377 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 ACTA1P68133 377 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 KDM4DQ6B0I6 523 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 GDPD3Q7L5L3 318 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 GID4Q8IVV7 300 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 RDH10Q8IZV5 341 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 EMG1Q92979 244 aaKnown RBP14.6□□□□□ -0.07
GTF3A-204ENST00000438571 RNF166Q96A37 237 aaPredicted RBP14.6□□□□□ -0.07
GTF3A-204ENST00000438571 MALSU1Q96EH3 234 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 ZNF714Q96N38 554 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 CHST5Q9GZS9 411 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 WNT10AQ9GZT5 417 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 RBFOX1Q9NWB1 397 aaKnown RBP14.6□□□□□ -0.07
GTF3A-204ENST00000438571 FAM53CQ9NYF3 392 aa14.6□□□□□ -0.07
GTF3A-204ENST00000438571 LOC107986453A0A1B0GWG9 222 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 HAND1O96004 215 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 BCL3P20749 454 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 ACTR3P61158 418 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 ZNF91Q05481 1191 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 ATP6AP1Q15904 470 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 RNF144BQ7Z419 303 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 AMIGO2Q86SJ2 522 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 ZNF676Q8N7Q3 588 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 OR4S1Q8NGB4 309 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 R3HDM4Q96D70 268 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 SNX22Q96L94 193 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 CIB1Q99828 191 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 GABARAPL1Q9H0R8 117 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.59□□□□□ -0.07
GTF3A-204ENST00000438571 SLC7A11Q9UPY5 501 aa14.59□□□□□ -0.07
GTF3A-204ENST00000438571 IGHV2-26A0A0B4J1V2 119 aa14.58□□□□□ -0.08
GTF3A-204ENST00000438571 IGKV1-9A0A0C4DH69 117 aa14.58□□□□□ -0.08
GTF3A-204ENST00000438571 METTL15A6NJ78 407 aa14.58□□□□□ -0.08
GTF3A-204ENST00000438571 G3V2T6 193 aa14.58□□□□□ -0.08
GTF3A-204ENST00000438571 RBP4P02753 201 aa14.58□□□□□ -0.08
GTF3A-204ENST00000438571 ZNF85Q03923 595 aa14.58□□□□□ -0.08
GTF3A-204ENST00000438571 TP53I3Q53FA7 332 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms