RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PSMD8P48556 350 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 TUFMP49411 452 aaKnown RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 CRISP1P54107 249 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCL7P80098 99 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 IL18Q14116 193 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 NCF4Q15080 339 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ALKBH6Q3KRA9 238 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 SMUG1Q53HV7 270 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 BEX5Q5H9J7 111 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 TPTE2P1Q5T6R2 138 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 STUMQ69YW2 141 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 DNAJC24Q6P3W2 148 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 CDKL3Q8IVW4 592 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ARRDC1Q8N5I2 433 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 JAGN1Q8N5M9 183 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 RNF182Q8N6D2 247 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 PQLC3Q8N755 202 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR52K2Q8NGK3 314 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR6Q1Q8NGQ2 317 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR4C6Q8NH72 309 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 SYNPRQ8TBG9 265 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 SPPL2BQ8TCT7 592 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 PTX4Q96A99 478 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ECHDC3Q96DC8 303 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 LINC00477Q96M19 166 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 JSRP1Q96MG2 331 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 PANX1Q96RD7 426 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ACTR3CQ9C0K3 210 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 WFDC1Q9HC57 220 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 SIRT7Q9NRC8 400 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 CLN6Q9NWW5 311 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ANK2Q01484 3957 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 TRPM6Q9BX84 2022 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ACANP16112 2415 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 KMT2CQ8NEZ4 4911 aaKnown RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCDC168Q8NDH2 2452 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 NCBP2LA6PVI3 153 aaKnown RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CASQ2O14958 399 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 SLC31A1O15431 190 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 SOCS1O15524 211 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CTAG2O75638 210 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCNB2O95067 398 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 HPRT1P00492 218 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 HLA-HP01893 362 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 HLA-DQA1P01909 254 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CD74P04233 296 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR56A5P0C7T3 313 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 LINC00869P0C866 280 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 RAB4AP20338 218 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 NPY1RP25929 384 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR1E1P30953 314 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZNF121P58317 390 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CDC20Q12834 499 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 DEFB109BQ30KR1 87 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 COX19Q49B96 90 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZNF684Q5T5D7 378 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 C9orf64Q5T6V5 341 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 C1orf185Q5T7R7 199 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 H3F3CQ6NXT2 135 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 TMEM53Q6P2H8 277 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 PRMT9Q6P2P2 845 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 TMEM205Q6UW68 189 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OTUD6AQ7L8S5 288 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 SNX20Q7Z614 316 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 MRPL55Q7Z7F7 128 aaKnown RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CBLN2Q8IUK8 224 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 APRG1Q8IVJ8 170 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZNF547Q8IVP9 402 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 STK40Q8N2I9 435 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CBR4Q8N4T8 237 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 COMMD1Q8N668 190 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 COX18Q8N8Q8 333 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 C11orf72Q8NBR9 251 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCDC148Q8NFR7 591 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR10AD1Q8NGE0 317 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR8U1Q8NH10 309 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR10G6Q8NH81 332 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCL4L1Q8NHW4 92 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 FLYWCH2Q96CP2 140 aaKnown RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 NRBF2Q96F24 287 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR10C1Q96KK4 312 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 BTN2A3PQ96KV6 586 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 HSD17B10Q99714 261 aaKnown RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 KRTAP4-1Q9BYQ7 146 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 UCK2Q9BZX2 261 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 C1orf198Q9H425 327 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 ELOVL6Q9H5J4 265 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 TMEM38AQ9H6F2 299 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 MED4Q9NPJ6 270 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 FBXL12Q9NXK8 326 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 BIRC6Q9NR09 4857 aa1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 DIDO1Q9BTC0 2240 aaKnown RBP1.56□□□□□ -2.16
HMGB1P31-201ENST00000437242 SVEP1Q4LDE5 3571 aa1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 NCOA6Q14686 2063 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 ANKRD12Q6UB98 2062 aa1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZGRF1Q86YA3 2104 aa1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 CACNA1CQ13936 2221 aa1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 TRAV40A0A0B4J280 105 aa1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 IGHV3OR16-9A0A0B4J2B5 98 aa1.55□□□□□ -2.16
HMGB1P31-201ENST00000437242 KIR2DS1A0A191URI9 304 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms