RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR4C12Q96R67 309 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 PCGF1Q9BSM1 259 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 IFITM5A6NNB3 132 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 SNRPGP15A8MWD9 76 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 FAM106CPP0CH98 169 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 SULT1A2P50226 295 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 TIGD3Q6B0B8 471 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 CT55Q8WUE5 264 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 FGF11Q92914 225 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 NAA60Q9H7X0 242 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 A0A1W2PR80 420 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 TFAP2AP05549 437 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 OR4E1P0C645 316 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 EMDP50402 254 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 GGTLC2Q14390 218 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 ANKRD37Q7Z713 158 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 CALHM1Q8IU99 346 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 KIAA1958Q8N8K9 716 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 C11orf54Q9H0W9 315 aaPredicted RBP9.99□□□□□ -0.81
SCN4A-201ENST00000435607 LHX9Q9NQ69 397 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 RTTNQ86VV8 2226 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 CBY3A6NI87 242 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 HINT1P49773 126 aaPredicted RBP9.99□□□□□ -0.81
SCN4A-201ENST00000435607 ETFDHQ16134 617 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF429Q86V71 674 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 SHISA5Q8N114 240 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 OR5H6Q8NGV6 325 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 DOK5Q9P104 306 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 EMCNQ9ULC0 261 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 TOPAZ1Q8N9V7 1692 aa9.99□□□□□ -0.81
SCN4A-201ENST00000435607 EML2O95834 649 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 PABPC1L2AQ5JQF8 200 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 PAQR9Q6ZVX9 377 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 STXBP6Q8NFX7 210 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 MCHR2Q969V1 340 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 FIZ1Q96SL8 496 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 BCL2L10Q9HD36 194 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 TECRQ9NZ01 308 aaKnown RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 CHST2Q9Y4C5 530 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 SOX15O60248 233 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 ARG1P05089 322 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 STAC2Q6ZMT1 411 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 COMMD1Q8N668 190 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 TCTEX1D1Q8N7M0 179 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 RFESDQ8TAC1 157 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 FAM210BQ96KR6 192 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 H3BP45 60 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM229BQ8NBD8 167 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 OR1L6Q8NGR2 347 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF707Q96C28 371 aaPredicted RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 PIK3IP1Q96FE7 263 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 CHODLQ9H9P2 273 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 ASCL3Q9NQ33 180 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 PIPOXQ9P0Z9 390 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 MPDU1O75352 247 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 CEACAM5P06731 702 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 ETV1P50549 477 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 OR5M11Q96RB7 305 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF256Q9Y2P7 627 aaPredicted RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 SNRNP40Q96DI7 357 aaKnown RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 MOGAT1Q96PD6 335 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 LPAR2Q9HBW0 351 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 CLEC2DQ9UHP7 191 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 LRRC37A3O60309 1634 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 SCN3AQ9NY46 2000 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 J3KRW8 73 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 SNRPNP63162 240 aaKnown RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 TM4SF20Q53R12 229 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 KRTCAP3Q53RY4 240 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 TMEM215Q68D42 235 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 Q6ZSR9 355 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 VN1R1Q9GZP7 353 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 BET1LQ9NYM9 111 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 RHBDL1O75783 438 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 PPOXP50336 477 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 BCDIN3DQ7Z5W3 292 aaKnown RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 ZNF683Q8IZ20 524 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 OR1N2Q8NGR9 330 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
SCN4A-201ENST00000435607 SLC22A13Q9Y226 551 aa9.98□□□□□ -0.81
SCN4A-201ENST00000435607 MBTPS2O43462 519 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 ZFP36L2P47974 494 aaKnown RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 HYAL1Q12794 435 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 WFDC5Q8TCV5 224 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 GPX7Q96SL4 187 aaPredicted RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 SNRNP200O75643 2136 aaKnown RBP9.97□□□□□ -0.81
SCN4A-201ENST00000435607 ADRB1P08588 477 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 MOGAT2Q3SYC2 334 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 P2RX4Q99571 388 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 CRYBG1Q9Y4K1 1723 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 MYF5P13349 255 aa9.97□□□□□ -0.81
SCN4A-201ENST00000435607 GZMHP20718 246 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms